Protein Alignment tHMG1 and nhp6

DIOPT Version :10

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_593314.1
• Gene: nhp6 / 2542878
• PomBaseID: SPAC57A10.09C
• Length: 108
• Species: Schizosaccharomyces pombe
• Alignment Length: 70
• Identity: 17/70 - (24%)
• Similarity: 39/70 - (55%)
• Gaps: 1/70 - (1%)

  Fly     8 PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKEK 72
            ||:.||||| :.:...|:.:|.::||.:..::....|:.|:.:...::..::|.|......|:.:
pombe    16 PKRNMSAFM-FFSIENREKMKTDNPDATFGQLGSLLGKRWKELTSTEREPYEEKARQDKERYERE 79

  Fly    73 LKQWN 77
            .|:::
pombe    80 RKEYD 84

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMG_box	8..76	CDD:459837	17/67 (25%)
nhp6	NP_593314.1	HMG-box_NHP6-like	3..83	CDD:438792	17/67 (25%)