DRSC/TRiP Functional Genomics Resources

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Protein Alignment tHMG1 and Tox3

DIOPT Version :10

Sequence 1:NP_651055.1 Gene:tHMG1 / 42650 FlyBaseID:FBgn0038978 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_766501.2 Gene:Tox3 / 244579 MGIID:3039593 Length:575 Species:Mus musculus


Alignment Length:66 Identity:22/66 - (33%)
Similarity:37/66 - (56%) Gaps:1/66 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKEK 72
            |:||:||:.|:...| :..||.::|:.:..|||.....||.::.:|.|.|::.....|..||.:.
Mouse   254 PQKPVSAYALFFRDT-QAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKA 317

  Fly    73 L 73
            |
Mouse   318 L 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tHMG1NP_651055.1 HMG_box 8..76 CDD:459837 22/66 (33%)
Tox3NP_766501.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..258 2/3 (67%)
HMG-box_TOX-like 255..324 CDD:438811 21/65 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 516..575
Blue background indicates that the domain is not in the aligned region.

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