Protein Alignment tHMG1 and penr-1

DIOPT Version :10

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_504410.1
• Gene: penr-1 / 178915
• WormBaseID: WBGene00015075
• Length: 317
• Species: Caenorhabditis elegans
• Alignment Length: 158
• Identity: 32/158 - (20%)
• Similarity: 50/158 - (31%)
• Gaps: 64/158 - (40%)

  Fly     2 SDCGARPKKPMSAFMLWMNSTGRKHIKAEH-----------PDFSVQEVSVKGGEMWRAMADEDK 55
            |:.|:.|||...:    ......|.:|||.           .||..::::....|..|   :||.
 Worm     8 SNAGSSPKKEKKS----ETFAALKSVKAEKRPAADSSDSEPEDFEEEQITHTEAEETR---NEDN 65

  Fly    56 --------------------IVWQESATTAMAEYKEKLKQWNFPKEHRFSDTQCICSSNTNQCPT 100
                                :|.::|.|:.:...:.|:.:|   .|.|..|         |....
 Worm    66 GQAIYEPDVMRPLIESFLEFLVQRQSETSTVHNMENKVAEW---AETRRDD---------NIDAG 118

  Fly   101 LFVYD--------------TMDDSMTPI 114
            |||.|              .|:||...|
 Worm   119 LFVLDFRKYLKSAVKFKNLQMNDSCAAI 146

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMG_box	8..76	CDD:459837	17/98 (17%)
penr-1	NP_504410.1	None