Protein Alignment tHMG1 and hmg-1.1

DIOPT Version :10

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_001370073.1
• Gene: hmg-1.1 / 175081
• WormBaseID: WBGene00001971
• Length: 95
• Species: Caenorhabditis elegans
• Alignment Length: 73
• Identity: 22/73 - (30%)
• Similarity: 34/73 - (46%)
• Gaps: 7/73 - (9%)

  Fly     8 PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKEK 72
            ||:.||||..||.. .|:.||  .|...|.:|:...|..|..:.|:.:  |::.|......|:..
 Worm    28 PKRAMSAFFFWMQE-NRERIK--KPGMGVADVAKAAGVEWGKLTDKSR--WEKKAADDKKRYEVD 87

  Fly    73 LKQWNFPK 80
            :.  |:.|
 Worm    88 IA--NYKK 93

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMG_box	8..76	CDD:459837	20/67 (30%)
hmg-1.1	NP_001370073.1	HMG-box_SF	15..91	CDD:469606	20/69 (29%)