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Protein Alignment tHMG1 and LOC1271029
DIOPT Version :10
| Sequence 1: | NP_651055.1 |
Gene: | tHMG1 / 42650 |
FlyBaseID: | FBgn0038978 |
Length: | 126 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_061513404.1 |
Gene: | LOC1271029 / 1271029 |
VectorBaseID: | AGAMI1_001276 |
Length: | 216 |
Species: | Anopheles gambiae |
| Alignment Length: | 127 |
Identity: | 28/127 - (22%) |
| Similarity: | 53/127 - (41%) |
Gaps: | 7/127 - (5%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 SDCGARPKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAM 66
:..|...|:||:|||:|.....|| :..::|.....|:|...|..|:.:.:.:|..:.:.|....
Mosquito 13 ASAGEHIKRPMNAFMVWSRGQRRK-MAQDNPKMHNSEISKNLGAQWKLLTEGEKRPFIDEAKRLR 76
Fly 67 AEYKEKLKQWNF-----PKEHRFSDTQCICSSNTNQCPTLFVYDTMDDSMTPICRKCLSKTR 123
|.:.::...:.: ||....|.|....:......|: ...:....|.:|:.|...|.|:
Mosquito 77 ALHMKEHPDYKYRPRRKPKPLVKSPTPNSANHPNGTGPS-SAKEPAPQSQSPVGRTSFSPTQ 137
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| tHMG1 | NP_651055.1 |
HMG_box |
8..76 |
CDD:459837 |
17/67 (25%) |
| LOC1271029 | XP_061513404.1 |
None |
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