DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT1 and HSP60

DIOPT Version :10

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_189041.1 Gene:HSP60 / 821983 AraportID:AT3G23990 Length:577 Species:Arabidopsis thaliana


Alignment Length:638 Identity:139/638 - (21%)
Similarity:238/638 - (37%) Gaps:150/638 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STLASPLSIA------GTRQS------------GASVRTQNVMAALSISNIVKSSLGPVGLDKML 48
            |.|||...||      .:|.|            |...|...:.....:::.||.::||.|.:.::
plant     6 SNLASKARIAQNARQVSSRMSWSRNYAAKEIKFGVEARALMLKGVEDLADAVKVTMGPKGRNVVI 70

  Fly    49 VDDIGDVTVTNDGATILRLLE----VEHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADE 109
            ....|...||.||.|:.:.:|    :::..|.::.::|...::..|||||...:|.         
plant    71 EQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGTTCATVLT--------- 126

  Fly   110 LVKQKIHPTSIISGYRIACKEACKYISEHLTAPVDELGRDSLINIAKTSMSSK--IIGADAEFFS 172
                           |....|.||.::..:.|.....|....::...|::.||  :|....|...
plant   127 ---------------RAIFAEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKSKARMISTSEEIAQ 176

  Fly   173 AMVVDAAQSVKITDPRGQAAYSIKAINVLKAH-GKSA-RESVLIPGYALNCTIASQQMPKKIVNA 235
            ...:.|....:|.:...:|...:....|:... ||:. .|..::.|..|:....|   |..|.| 
plant   177 VGTISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYTS---PYFITN- 237

  Fly   236 KIACLDFSLQKT-KMKMGVQVLINDPDKLEAI----RARELDITKERINMILGTGV------NVV 289
                     ||| |.::...:::....|:.:|    :..||.:.::|..:|:...|      .::
plant   238 ---------QKTQKCELDDPLILIHEKKISSINSIVKVLELALKRQRPLLIVSEDVESDALATLI 293

  Fly   290 L--VSGGVDDLCMKYFVEAGAMAVRRVKKSDLKIIAKATGAAFITSLTNMDGEESFDASMVGEAA 352
            |  :..|:....:|      |......:|::|:.:|..||...||....|: .|..|.||:|...
plant   294 LNKLRAGIKVCAIK------APGFGENRKANLQDLAALTGGEVITDELGMN-LEKVDLSMLGTCK 351

  Fly   353 EVAQERICDDELIL-----IKGTKAR-----------------------------AAASIILRGP 383
            :|...:  ||.:||     .||.:.|                             ..|.:.:.|.
plant   352 KVTVSK--DDTVILDGAGDKKGIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGA 414

  Fly   384 NDFYCDEMERSVHDALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASREQLAIAEFAKSL 448
            ::....|.:..|.|||...|..:| :.::.|||......:..||...|  |:.:|....:..::.
plant   415 SEAEVGEKKDRVTDALNATKAAVE-EGILPGGGVALLYAARELEKLPT--ANFDQKIGVQIIQNA 476

  Fly   449 LVIP-KTLSVNAAKDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPA-- 510
            |..| .|::.||..:...:|.||....|        .||   |.|..:|...|..|||:::|.  
plant   477 LKTPVYTIASNAGVEGAVIVGKLLEQDN--------PDL---GYDAAKGEYVDMVKAGIIDPLKV 530

  Fly   511 -------MSKIKSLKFATEAAITILRIDDMIKLNPEDKSGKSYADACAAGELD 556
                   .:.:.||...|||.:..|..|       |.:||.:.|.....|.:|
plant   531 IRTALVDAASVSSLLTTTEAVVVDLPKD-------ESESGAAGAGMGGMGGMD 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 127/602 (21%)
HSP60NP_189041.1 GroEL 34..554 CDD:239460 123/579 (21%)

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