DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT1 and mkks

DIOPT Version :10

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:XP_021336215.1 Gene:mkks / 393134 ZFINID:ZDB-GENE-040426-757 Length:566 Species:Danio rerio


Alignment Length:570 Identity:121/570 - (21%)
Similarity:232/570 - (40%) Gaps:100/570 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 ISNIVKSSLGPVGLDKMLVDDI-GDVTVTNDGATILRLLEVEHPAAKVLVELAQLQDEEVGDGTT 94
            :.||:.::.||.|..|.:.::: |.|..|:....:|:.||:..|..|::....|.......|...
Zfish    29 LRNILSTAYGPTGRLKQIHNNVGGHVLTTSTSTALLKRLEMSEPLLKLISTALQHHTTRYSDSGL 93

  Fly    95 SVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYI---SEHLTAPVDELGRDSLINIAK 156
            .:.|....|::|..   |..:..::.|..|:...::...|:   |.....||:....|||:.:|.
Zfish    94 FMGIFTLTLIENTK---KYGLRTSTAIKVYKHLVEQCNVYLKGDSCGCKVPVEFSSCDSLVALAH 155

  Fly   157 TSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQA-AYSIKAIN----------VLKAHGKSARE 210
            :.::||         .|.::|:.::.:|:....|| .|||...:          .:...|:|...
Zfish   156 SMITSK---------PACMLDSRETQQISSLITQAFLYSIPCNSSGTACFGRTVTIGIEGQSVNH 211

  Fly   211 SVLIPGYALNCTIASQQMPKKIVNA-----KIACLDFSLQKTKMKMGVQVL-----IN-DPDKLE 264
            |.:.||..|:  :....:|..:...     |:.....||.....::|...|     :| :.|.|:
Zfish   212 SSVFPGLLLD--VPEMLLPGDLERLGDGPFKVVLFGVSLSGDISEVGDVALEVHRGLNPERDLLQ 274

  Fly   265 AIRARELDITKERINMILGTGVNVVLVSGGVDDLCMKYFVEAGAMAVRRVKKSDLKIIAKATGAA 329
            .:......:.|:::::.....|        |..:...|..|...:.:.|:..:.::..||.|||.
Zfish   275 QLLKIGEQVVKDKVSLFACQKV--------VHPVLQHYLREHEVVVIERLGLALMEPFAKITGAR 331

  Fly   330 FITSLTNMDGEESFDASMVGEAAEVAQERICDDELILIKGTKARAAASIILRGPNDFYCDEM--- 391
            .:.||.::...|::     |..|.:..:.....:|:.:..:|..|.::::|...|:...:|:   
Zfish   332 AVASLFSLVPMEAY-----GLVAGLCFQDCGSKKLLQLLSSKHAAISTMVLCHRNETMLEELKVC 391

  Fly   392 ----ERSVHDALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLA-----------SREQLAI 441
                :|:.|    |::..|.....:.||||.|..|:.::.:...|.|           |...:|:
Zfish   392 AMTCQRAEH----VLRLTLREPYALLGGGCTETQLATHITHMNQSTAPTTAAALGISHSEFLMAV 452

  Fly   442 AEFAKSLLVIPKTLSVNAAKDATDLVAKLRSYHN-----SSQTK----------PERSDLKWTGL 491
            ..|..|||.:..:|.    .|..|.:..|...|.     ||||:          .:||:|:.|.|
Zfish   453 ESFRSSLLAVALSLE----HDGQDCLIDLTYGHRWVMDISSQTEVKHTCGCGLLEDRSNLEKTHL 513

  Fly   492 D----LIEGVVRDNK--KAGVLEPAMSKIKSLKFATEAAITILRIDDMIK 535
            :    ....|..:|.  :..||:...:|:.:|..|.|.|..:|.:..:||
Zfish   514 NTACQTFSPVFLENNDTQPKVLDSFSAKLNALNVAVEMASLVLDVKYIIK 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 121/570 (21%)
mkksXP_021336215.1 Cpn60_TCP1 29..565 CDD:395068 121/570 (21%)

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