DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT1 and tcp1

DIOPT Version :10

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:XP_002933907.1 Gene:tcp1 / 100487607 XenbaseID:XB-GENE-939843 Length:555 Species:Xenopus tropicalis


Alignment Length:554 Identity:408/554 - (73%)
Similarity:476/554 - (85%) Gaps:1/554 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LASPLSIAGTRQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLL 68
            :..||::.|.|.:|.:||:||||||.||:||||||||||||||||||||||||:||||||||:||
 Frog     1 MEGPLAVFGERSTGEAVRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLL 65

  Fly    69 EVEHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACK 133
            ||||||||||.|||.|||.|||||||||||:||||||||||||||||||||:|.|||:|||||.:
 Frog    66 EVEHPAAKVLCELADLQDNEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVIGGYRLACKEAVR 130

  Fly   134 YISEHLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSIKAI 198
            ||:|:||...||||::.|:|.|:|||||||||.|::||||||||||.:||..||:|||.|.|.:|
 Frog   131 YINENLTINTDELGKECLLNAARTSMSSKIIGVDSDFFSAMVVDAALAVKYVDPKGQARYPINSI 195

  Fly   199 NVLKAHGKSARESVLIPGYALNCTIASQQMPKKIVNAKIACLDFSLQKTKMKMGVQVLINDPDKL 263
            |||||||:|.:||:|:.||||||.:.||.|.|:|||||||||||||||||||:||||:|:||.||
 Frog   196 NVLKAHGRSQKESILVNGYALNCVVGSQSMNKRIVNAKIACLDFSLQKTKMKLGVQVIISDPTKL 260

  Fly   264 EAIRARELDITKERINMILGTGVNVVLVSGGVDDLCMKYFVEAGAMAVRRVKKSDLKIIAKATGA 328
            :.||.||.|||||||..||.||.||:|.:||:||:|:||||:|||||||||.|.|||.|||||||
 Frog   261 DQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVDAGAMAVRRVLKKDLKRIAKATGA 325

  Fly   329 AFITSLTNMDGEESFDASMVGEAAEVAQERICDDELILIKGTKARAAASIILRGPNDFYCDEMER 393
            ...::|.|::|||||:|||:|:|.||.|||||||||||:|.||||..|||||||.|||.||||||
 Frog   326 IMCSTLANLEGEESFEASMLGQAEEVVQERICDDELILVKNTKARTCASIILRGANDFMCDEMER 390

  Fly   394 SVHDALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASREQLAIAEFAKSLLVIPKTLSVN 458
            ||||||||||||||||.||.|||.|||||||||||:|||:.|||||||||||::||||||||:||
 Frog   391 SVHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARALLVIPKTLAVN 455

  Fly   459 AAKDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEA 523
            ||:|:||||||||::||.:|..|||.:|||.||||:.|..||||:|||.||.:.|.|||||||||
 Frog   456 AAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLLNGKPRDNKQAGVFEPTLVKTKSLKFATEA 520

  Fly   524 AITILRIDDMIKLNPEDKSGK-SYADACAAGELD 556
            |||||||||:|||:||.|..| .|.:|..:|.::
 Frog   521 AITILRIDDLIKLHPEAKEEKGKYHEAVQSGSIE 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 399/525 (76%)
tcp1XP_002933907.1 TCP1_alpha 9..535 CDD:239451 399/525 (76%)

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