DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpn7 and AT4G24820

DIOPT Version :10

Sequence 1:NP_651048.1 Gene:Rpn7 / 42641 FlyBaseID:FBgn0028688 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_567709.1 Gene:AT4G24820 / 828585 AraportID:AT4G24820 Length:387 Species:Arabidopsis thaliana


Alignment Length:379 Identity:193/379 - (50%)
Similarity:277/379 - (73%) Gaps:2/379 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KNPNLELAQTKFLLTLAEYK--QDAALKAKLLEAIRTENMAPWYEHICSELGWTVDKDLLARMKE 75
            :.|:|.||...||||..:..  :...||:::|:.||:..|||.||.:.:.....:|:.||..|:.
plant     9 QQPHLILANKLFLLTHPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDLDQSLLESMRA 73

  Fly    76 NNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETAFRKTYEKTVSLGHRLDI 140
            .|..|:::||..|.|||:||||.|||||:|.|:.|..||.||..|....:.|..|||::|.::|:
plant    74 ANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLKLTEGKTVAVGQKMDV 138

  Fly   141 VFHLIRLGLFYLDHDLITRNIDKAKYLIEEGGDWDRRNRLKVYQGVYSVAVRDFKAAATFFLDTV 205
            ||:.::|..||:|.||::::|||||.|.||||||:|:||||||:|:|.::.|:||.||:.|||::
plant   139 VFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMSTRNFKKAASLFLDSI 203

  Fly   206 STFTSYELMDYPTFVRYTVYVAMIALPRNELRDKVIKGSEIQEVLHGLPDVKQFLFSLYNCQYEN 270
            ||||:||:..|.||:.|||..::|.|.|..|:.||:...||..||..:|.:.:||.|||.|||:.
plant   204 STFTTYEIFPYETFIFYTVLTSIITLDRVSLKQKVVDAPEILTVLGKIPFLSEFLNSLYECQYKA 268

  Fly   271 FYVHLAGVEKQLRLDYLIHPHYRYYVREMRILGYTQLLESYRSLTLQYMAESFGVTVEYIDQELA 335
            |:...||:..|::.|..::||:|:|:||:|.:.|:|.||||:|:|::.||::|||:|::|||||:
plant   269 FFSAFAGMAVQIKYDRYLYPHFRFYMREVRTVVYSQFLESYKSVTVEAMAKAFGVSVDFIDQELS 333

  Fly   336 RFIAAGRLHAKVDRVGGIVETNRPDNKNWQYQATIKQGDLLLNRIQKLSRVINI 389
            ||||||:||.|:|:|.|::||||||.||..|||||||||.||||||||||||::
plant   334 RFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn7NP_651048.1 RPN7 15..382 CDD:227514 186/368 (51%)
AT4G24820NP_567709.1 RPN7 9..380 CDD:227514 186/370 (50%)

Return to query results.
Submit another query.