DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqfR and CLINT1

DIOPT Version :10

Sequence 1:NP_732736.2 Gene:lqfR / 42632 FlyBaseID:FBgn0261279 Length:1415 Species:Drosophila melanogaster
Sequence 2:NP_001182484.1 Gene:CLINT1 / 9685 HGNCID:23186 Length:643 Species:Homo sapiens


Alignment Length:641 Identity:232/641 - (36%)
Similarity:307/641 - (47%) Gaps:157/641 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISMWKVRELADKVTNVVMNYTETEGKVREATNDDPWGPTGPLMQELAYSTFSYETFPEVMSMLWK 70
            ::|||||||.||.|||||||:|.|.|||||||||||||:|.||.|:|.:||.||.|||:|:|||.
Human     2 LNMWKVRELVDKATNVVMNYSEIESKVREATNDDPWGPSGQLMGEIAKATFMYEQFPELMNMLWS 66

  Fly    71 RMLQDNKTNWRRTYKSLLLLNYLVRNGSERVVTSSREHIYDLRSLENYTFTDEGGKDQGINVRHK 135
            |||:|||.||||.|||||||.||:||||||||||:|||||||||||||.|.||.|||||||:|.|
Human    67 RMLKDNKKNWRRVYKSLLLLAYLIRNGSERVVTSAREHIYDLRSLENYHFVDEHGKDQGINIRQK 131

  Fly   136 VRELIDFIQDDDRLREERKKAKKNKDKYIGMSSDAMGMRSGGYSGYSGGSGGGGGGSGGYNDGDY 200
            |:||::|.||||||||||||||||||||:|:|||::               ||...|..| |.:.
Human   132 VKELVEFAQDDDRLREERKKAKKNKDKYVGVSSDSV---------------GGFRYSERY-DPEP 180

  Fly   201 RSSRGDNWYSDKSA-----------DKDRYEDDDT--------HYDGEREGSDSDSPSPRRNYRY 246
            :|...:.|..:|||           ||.....|||        ..|.....||||.....|    
Human   181 KSKWDEEWDKNKSAFPFSDKLGELSDKIGSTIDDTISKFRRKDREDSPERCSDSDEEKKAR---- 241

  Fly   247 NDRASPAEVASEAKPSSLNMNIRSKTVSSPVSKQPTSTASAKPALSQKKIDLGAAANF--GKPAP 309
            ..|:...|...|.:      .:.:|.:....:.:.|:|...:.|...|.|||||||::  .|.:|
Human   242 RGRSPKGEFKDEEE------TVTTKHIHITQATETTTTRHKRTANPSKTIDLGAAAHYTGDKASP 300

  Fly   310 GGAAGIHSPTHRDTPTSVDLMGGASPSPSTSKANNNTQSNNNDLLDDLFKTCSPPPGQEKTLNSA 374
            ...|..|:| .....|||       ||..:|          .||: |||                
Human   301 DQNASTHTP-QSSVKTSV-------PSSKSS----------GDLV-DLF---------------- 330

  Fly   375 AVIVDDDDDFNPRASDASQQEFGDFASAFGQPSAGSTISEPPSTGLVPAANDEFADFAAFQGSTT 439
                    |...:::..|...||.||. ||..:|..:.   ||.....:.|.:|.|::||..:.:
Human   331 --------DGTSQSTGGSADLFGGFAD-FGSAAASGSF---PSQVTATSGNGDFGDWSAFNQAPS 383

  Fly   440 STSALDGNLLKTAT------------------PANDSFDLFNSAPTSTAAATTATDL-------- 478
            ...|..|....:|:                  .|::|.|||:...:|.|..|::..:        
Human   384 GPVASSGEFFGSASQPAVELVSGSQSALGPPPAASNSSDLFDLMGSSQATMTSSQSMNFSMMSTN 448

  Fly   479 LAGLGDLSIHQSMPM-----------------------AVEEQLASS-ND------------SMS 507
            ..||| |.:.:|.|:                       :|.:.|.|: :|            .|.
Human   449 TVGLG-LPMSRSQPLQNVSTVLQKPNPLYNQNTDMVQKSVSKTLPSTWSDPSVNISLDNLLPGMQ 512

  Fly   508 SASPQPPSEAMRLAFSKAQKQLRDLMQVQSASAVAQVAAILGELHNSNALPGFTTP 563
            .:.||.||....:.....|:.:..:.|...|..::..:.:|.....:|||.|...|
Human   513 PSKPQQPSLNTMIQQQNMQQPMNVMTQSFGAVNLSSPSNMLPVRPQTNALIGGPMP 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfRNP_732736.2 ENTH_EpsinR 28..153 CDD:340786 96/124 (77%)
Telomere_reg-2 1072..1184 CDD:462990
CLINT1NP_001182484.1 ENTH_EpsinR 24..149 CDD:340786 96/124 (77%)
Nucleoporin_FG2 <304..416 CDD:435043 33/158 (21%)
Blue background indicates that the domain is not in the aligned region.

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