DRSC/TRiP Functional Genomics Resources

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Protein Alignment: lqfR and AT3G23350

Sequence 1:NP_732736.2 Gene:lqfR FlyBaseID:FBgn0261279 Length:1415 Species:Drosophila melanogaster
Sequence 2:NP_001325534.1 Gene:AT3G23350 AraportID:AT3G23350 Length:282 Species:Arabidopsis thaliana

Alignment Length:143 Identity:43/144 (30%)
Similarity:74/144 (51%) Gaps:8/144 (6%)


  Fly    21 VVMNYTETEGKVREATNDDPWGPTGPLMQELAYSTFSYETFPEVMSMLWKRMLQDNK--TNWRRT 83
            |:.:.||.|..|.|.||.||..|....|.::|.::|....:..::.:|.:::.:|.:  .|||..
plant    28 VLTDVTEAELLVEEVTNGDPSSPDAKTMTKIAEASFDTVEYWRIVDVLHRKIGKDEREIKNWREA 92

  Fly    84 YKSLLLLNYLVRNGSERVVTSSREHIYDL---RSLENYTFTDEGGKDQGINVRHKVRELIDFIQD 145
            ||:::||.:|:.:|.   :....:.:|||   |.|..:.:.|..|.|.|..|:.|..::...:..
plant    93 YKAMVLLEFLLMHGP---IHLPHDFLYDLDHFRFLSTFQYVDNNGFDWGAQVQKKADQIQTLLLG 154

  Fly   146 DDRLREERKKAKK 158
            .:.|||.|.||.|
plant   155 KEELREARLKALK 167

Known Domains:


GeneSequenceDomainRegion External IDIdentity
lqfRNP_732736.2 ENTH_epsin 27..150 CDD:239627 35/128 (27%)
DUF4045 <226..459 CDD:289995
Telomere_reg-2 1072..1184 CDD:287202
AT3G23350NP_001325534.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR12276
Phylome 00.000 Not matched by this tool.
11.100

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