DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH8 and ptprga

DIOPT Version :10

Sequence 1:NP_651033.2 Gene:CAH8 / 42625 FlyBaseID:FBgn0038956 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_001316793.1 Gene:ptprga / 561197 ZFINID:ZDB-GENE-101101-4 Length:1414 Species:Danio rerio


Alignment Length:262 Identity:86/262 - (32%)
Similarity:128/262 - (48%) Gaps:27/262 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 WPEKYPNCGGSEQSPIAISRRKA-IPLNLPPLIFALYDEFFDELVTIRNSGHTVEFKVPTTIYGV 99
            |...:|.|....||||.|:.:.. :.:....|....:|.......:::|:|.||...:....   
Zfish    71 WAAAFPECQERNQSPINIADQDTKVSMEYQELTLDGFDAESSNKTSMKNTGKTVAIFLKDDY--- 132

  Fly   100 KPYVTGGLLRDCYDAEAVHFHWG-SPESKGSEHLLNGRRFDLEMHI-VHRNTKYLNLEEAVKYSD 162
              :|.|..|...:.||.|.|||| |..|.||||.:|||||.:||.| ::.:..:.:|..|::...
Zfish   133 --FVRGAGLPGRFKAEKVEFHWGQSNGSDGSEHSINGRRFPVEMQIFMYNSDDFDSLNTAIREKR 195

  Fly   163 GVTVLAVLFKVVRSGPFFYQPGLSEIFSSL---LHLGNFNASYTVQERLTLGSLLGSLDRGNFYT 224
            .:..:||.|:|    .|...|.:..|...|   :|    :...|..|...|..||.| ..|::|.
Zfish   196 VIAAMAVFFQV----DFKDNPAVDPIIHGLRGVVH----HEKETFLEPFVLRDLLPS-SIGSYYR 251

  Fly   225 YKGSLTTPPCSPVVQWHVFGEVLPISHQDLPKFWNLRDERGRPLLK-------NFRPLQSQENRL 282
            |.|||||||||.||:|.||...:.:|::.|..|:::.....:..:|       |||||||.:||.
Zfish   252 YIGSLTTPPCSKVVEWIVFSRPVLLSYKQLEAFYSIFTTEQQDHVKSVEYLRNNFRPLQSLDNRE 316

  Fly   283 IF 284
            :|
Zfish   317 VF 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH8NP_651033.2 Carb_anhydrase 33..286 CDD:459707 86/262 (33%)
ptprgaNP_001316793.1 alpha_CARP_receptor_like 71..319 CDD:239396 86/262 (33%)
FN3 348..426 CDD:214495
R-PTPc-G-1 817..1090 CDD:350505
R-PTP-G-2 1174..1378 CDD:350508
Blue background indicates that the domain is not in the aligned region.

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