DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH8 and CARPA

DIOPT Version :10

Sequence 1:NP_651033.2 Gene:CAH8 / 42625 FlyBaseID:FBgn0038956 Length:303 Species:Drosophila melanogaster
Sequence 2:XP_061501342.1 Gene:CARPA / 1272307 VectorBaseID:AGAMI1_011182 Length:341 Species:Anopheles gambiae


Alignment Length:260 Identity:67/260 - (25%)
Similarity:120/260 - (46%) Gaps:48/260 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GSEQSPIAISRRKAIPLNLPPLIFALYDEFFDELVTIRNSGHTVEFKVPTTIYGVKPYV--TGGL 107
            |..||||.:...|   |...|.:.:|:.:......|:.|:|.::.|:|..   ..|.:|  :.|.
Mosquito    54 GRRQSPINVEPEK---LLFDPYLRSLHIDKHKISGTLHNTGQSLVFRVEK---DTKQHVNISSGP 112

  Fly   108 LRDCYDAEAVHFHWGSPESKGSEHLLNGRRFDLEMHIVHRNTK-YLNLEEAVKYSDGVTVLAVLF 171
            |...|..|.::||:|:..::||||.::|..|..|:.:...|.: |.|:.||...:.|:..::::.
Mosquito   113 LAYRYQFEEIYFHYGTDNNQGSEHHIHGYSFPGEIQLYGFNKELYHNMSEAQHKAQGIVGISLML 177

  Fly   172 KVVRSGPFFYQPG-----LSEIFSSLLHLGNFNASYTVQERLTLGSLLGSLDRGNFYTYKGSLTT 231
            ::..:      |.     ::..|:.:|:.|    |.|....::|.|||.:.::  :.||:||.|.
Mosquito   178 QIGDT------PNPELRIITSAFNKVLYKG----SSTPIRHISLRSLLPNTEQ--YMTYEGSTTH 230

  Fly   232 PPCSPVVQWHVFGEVLPISHQDL-------------PKFWNLRDERGRPLLKNFRPLQSQENRLI 283
            |.|.....|.:..:.:.|:.|:|             ||         .||..|.||||:..:|.:
Mosquito   231 PGCWESTVWIILNKPIYITKQELYALRKLMQGSEQTPK---------APLGNNARPLQALHHRTV 286

  Fly   284  283
            Mosquito   287  286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH8NP_651033.2 Carb_anhydrase 33..286 CDD:459707 67/260 (26%)
CARPAXP_061501342.1 None

Return to query results.
Submit another query.