DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6028 and fahd-1

DIOPT Version :10

Sequence 1:NP_651002.3 Gene:CG6028 / 42589 FlyBaseID:FBgn0038924 Length:293 Species:Drosophila melanogaster
Sequence 2:NP_498715.1 Gene:fahd-1 / 176109 WormBaseID:WBGene00022798 Length:214 Species:Caenorhabditis elegans


Alignment Length:196 Identity:69/196 - (35%)
Similarity:111/196 - (56%) Gaps:10/196 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 KIICIGLNYQDHCDEQNKPTPKEPLFFSKFNNALVGPQDNVIAHAASSKIDWEVELVCVIGKVAR 148
            ||:|:|.||:||..|.....||:|:.|.|..|:.:...:.::|......:..||||..||.|.|.
 Worm    13 KIVCVGRNYKDHALELGNAIPKKPMLFVKTVNSFIVEGEPIVAPPGCQNLHQEVELGVVISKKAS 77

  Fly   149 QVPKSQAMDYVFGYSVAQDISARDWQKE--RNGGQFLMGKSMDTFLPLGPAVVHKSLVPDVYNLN 211
            ::.||.||||:.||:||.|::|||:|.|  :.|..:.:.||.|...|:| ..:..|.:|:.:::.
 Worm    78 RISKSDAMDYIGGYTVALDMTARDFQDEAKKAGAPWFLAKSFDGSCPIG-GFLPVSDIPNPHDVE 141

  Fly   212 LKTWVNGVEKQNGNTGNLIFKLDDVINRLSQTITLLPGDIIVTGTPKGVGMHRTPPEFLQPGDVV 276
            |...:||.::|...|..:||.:..::...:|..||..||:::||||.||..       :..|||:
 Worm   142 LFCKINGKDQQRCRTDVMIFDIPTLLEYTTQFFTLEVGDVVLTGTPAGVTK-------INSGDVI 199

  Fly   277 Q 277
            :
 Worm   200 E 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6028NP_651002.3 YcgM 77..291 CDD:439949 69/196 (35%)
fahd-1NP_498715.1 YcgM 12..200 CDD:439949 69/194 (36%)

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