Protein Alignment Polr1H and RPA12

DIOPT Version :10

• Sequence 1: NP_524439.1
• Gene: Polr1H / 42563
• FlyBaseID: FBgn0038903
• Length: 120
• Species: Drosophila melanogaster
• Sequence 2: NP_012597.1
• Gene: RPA12 / 853526
• SGDID: S000003824
• Length: 125
• Species: Saccharomyces cerevisiae
• Alignment Length: 117
• Identity: 43/117 - (36%)
• Similarity: 61/117 - (52%)
• Gaps: 6/117 - (5%)

  Fly    10 FCPSCGSIL--PELQVKGNVICYNCKKEFQPDVYSGEKSEFTIHFNTYDPS----KVFNRTKRES 68
            ||..||.:|  |...:..||.|..||..:....:|..|...|...:.:..|    |...:|..:.
Yeast     9 FCLDCGDLLENPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSLRAKKSVVKTSLKK 73

  Fly    69 ESDADGPVVERKCPKCNHDKMSYATLQLRSADEGQTVFFTCLKCKFKESENS 120
            ....||..::.|||:|.:::|:|.||||||||||.|||:||..|.:|...|:
Yeast    74 NELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFRTNN 125

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr1H	NP_524439.1	RPB9	10..115	CDD:441202	41/110 (37%)
		Zn-ribbon_RPA12	73..119	CDD:259792	25/45 (56%)
RPA12	NP_012597.1	RPB9	9..122	CDD:441202	42/112 (38%)
		Zn-ribbon_RPA12	78..124	CDD:259792	25/45 (56%)