DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpI12 and T24H10.1

DIOPT Version :8

Sequence 1:NP_524439.1 Gene:RpI12 / 42563 FlyBaseID:FBgn0038903 Length:120 Species:Drosophila melanogaster
Sequence 2:NP_495941.1 Gene:T24H10.1 / 174450 WormBaseID:WBGene00012000 Length:308 Species:Caenorhabditis elegans

Alignment Length:33 Identity:16/34 (47%)
Similarity:19/34 (56%) Gaps:0/34 (0%)


  Fly    80 KCPKCNHDKMSYATLQLRSADEGQTVFFTCLKC 112
            ||.||.....:|..||.||:||..|.|..||:|
 Worm   269 KCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLEC 301

Known Domains:


GeneSequenceDomainRegion External IDIdentity
RpI12NP_524439.1 RPB9 10..119 CDD:224510 16/34 (47%)
Zn-ribbon_RPA12 73..119 CDD:259792 16/34 (47%)
T24H10.1NP_495941.1 TFSII 4..308 CDD:273592 16/34 (47%)
TFS2N 8..83 CDD:197766
TFS2M 146..246 CDD:128786
Zn-ribbon_TFIIS 261..307 CDD:259796 16/34 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG1594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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