DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6800 and Prp4k

DIOPT Version :10

Sequence 1:NP_650984.1 Gene:CG6800 / 42562 FlyBaseID:FBgn0038902 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001286884.1 Gene:Prp4k / 38032 FlyBaseID:FBgn0027587 Length:912 Species:Drosophila melanogaster


Alignment Length:228 Identity:67/228 - (29%)
Similarity:107/228 - (46%) Gaps:14/228 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SRYKMLEKIGEGVHGCVFKAIDLQRNK-EVAIKKVALKNKFGNIALNTLREIKTLQLCKSEYILD 70
            :||.:....|:||...|.:..|..|.: .||||.:..........|..|..:|.|.....|....
  Fly   590 NRYLVNGYTGQGVFSNVVRGRDQARGQANVAIKIIRNNEIMHKTGLRELEILKKLNDADPEDRFH 654

  Fly    71 IIDIYPDL---TGLSLVLEYQPDTLYNRLK---SEVNPLSRQQVRKFAHQMFKGIAYLHEAGLMH 129
            .:.:|...   ..|.:|.|.....|...||   ..|. |..:.||.:..|:|..:..|.:.|::|
  Fly   655 CLRLYRHFFHKQHLCMVFEPLAMNLREVLKKYGKNVG-LHIKAVRSYTQQLFLALKLLKKTGILH 718

  Fly   130 RDIKPANLLISDTDM-LKIADFGLARLYFPEDESRLYSPQVSTRWYRAPEILFGSQKYGTGVDMW 193
            .||||.|:|:::.:: ||:.|||.|......:    .:|.:.:|:||:|||:.|. .|..|:|.|
  Fly   719 ADIKPDNILVNENNLILKLCDFGSASAISDNE----ITPYLVSRFYRSPEIILGI-PYDYGIDTW 778

  Fly   194 AAGCVVAEMLRGVPLFAGTTDIEQLAIIIRTLG 226
            :|||.:.|:..|..||:|.::.:.|...:...|
  Fly   779 SAGCTIYELYTGKILFSGKSNNQMLKFFMDVKG 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6800NP_650984.1 STKc_CCRK 8..295 CDD:270826 67/227 (30%)
Prp4kNP_001286884.1 STKc_PRP4 591..908 CDD:271037 67/227 (30%)

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