DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6800 and Cdk20

DIOPT Version :10

Sequence 1:NP_650984.1 Gene:CG6800 / 42562 FlyBaseID:FBgn0038902 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001020923.2 Gene:Cdk20 / 364666 RGDID:1305219 Length:346 Species:Rattus norvegicus


Alignment Length:281 Identity:123/281 - (43%)
Similarity:181/281 - (64%) Gaps:3/281 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RYKMLEKIGEGVHGCVFKAIDLQRNKEVAIKKVALKNKFGNIALNTLREIKTLQ-LCKSEYILDI 71
            :|.:|.:||||.||.||||..::..:.||:|||||:.....|....|||||.|| :..|:|::.:
  Rat     3 QYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGIPNQALREIKALQEIEDSQYVVQL 67

  Fly    72 IDIYPDLTGLSLVLEYQPDTLYNRLKSEVNPLSRQQVRKFAHQMFKGIAYLHEAGLMHRDIKPAN 136
            ..::|...|..|..|:....|...::....||:..||:.:...:.||:|:.|...::|||:||||
  Rat    68 KAVFPHGAGFVLAFEFMLSDLAEVVRHAQRPLAPAQVKSYLQMLLKGVAFCHANNIVHRDLKPAN 132

  Fly   137 LLISDTDMLKIADFGLARLYFPEDESRLYSPQVSTRWYRAPEILFGSQKYGTGVDMWAAGCVVAE 201
            ||||.:..||||||||||::.| |..|||:.||:||||||||:|:|:::|..|||:||.||::.|
  Rat   133 LLISASGQLKIADFGLARVFSP-DGGRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGCIMGE 196

  Fly   202 MLRGVPLFAGTTDIEQLAIIIRTLGSPRLNQWPELTSLPDYSKIRFPNSVGIHWDNLFPSCTHAV 266
            :|.|.|||.|..|||||..::|.||:|....|||:|.||||:||.|.....:..:.:.|..:|..
  Rat   197 LLNGSPLFPGENDIEQLCCVLRILGTPSPRVWPEITELPDYNKISFKEQAPVPLEEVLPDASHQA 261

  Fly   267 EINLVSNLVVYNPKNRLKASE 287
             ::|:...::|.|:.|:.||:
  Rat   262 -LDLLGQFLLYPPRQRIAASQ 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6800NP_650984.1 STKc_CCRK 8..295 CDD:270826 123/281 (44%)
Cdk20NP_001020923.2 STKc_CCRK 3..289 CDD:270826 123/281 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..324
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.