Protein Alignment CG6800 and cdk-8

DIOPT Version :10

• Sequence 1: NP_650984.1
• Gene: CG6800 / 42562
• FlyBaseID: FBgn0038902
• Length: 302
• Species: Drosophila melanogaster
• Sequence 2: NP_492357.2
• Gene: cdk-8 / 172677
• WormBaseID: WBGene00000409
• Length: 588
• Species: Caenorhabditis elegans
• Alignment Length: 315
• Identity: 94/315 - (29%)
• Similarity: 157/315 - (49%)
• Gaps: 43/315 - (13%)

  Fly    13 EKIGEGVHGCVFKAIDLQRNKEVAIKKVALKNKFG-NIALNTLREIKTLQLCKSEYILDIIDIYP 76
            ::||.|.:|.|:||:..::|.:...|:.|||...| ..:::..|||...:..:...::.:..::
 Worm    30 KEIGRGTYGLVYKAVPKKQNGQFPNKEYALKMIEGQGFSMSACREIALFRELRHPNLICLQRVF- 93

  Fly    77 DLTG---LSLVLEYQPDTLYNRL------KSEVNPL--SRQQVRKFAHQMFKGIAYLHEAGLMHR 130
             ||.   :.|:|:|....|::.:      ||:..|:  .|..|:....|:..|:.|||...::||
 Worm    94 -LTNEKKVWLLLDYAEHDLWHVIKHHRTAKSKKVPIMVPRNMVKNILFQILSGMHYLHSNWVLHR 157

  Fly   131 DIKPANLLI---SDTDM---LKIADFGLARLYF-PEDESRLYSPQVSTRWYRAPEILFGSQKYGT 188
            |:||||:|:   ...||   :||||.|.:|:|. |........|.|.|.||||||:|.|::.|..
 Worm   158 DLKPANILLMGDGPPDMRGRVKIADLGFSRIYANPLKPMAELDPVVVTFWYRAPELLLGAKHYTK 222

  Fly   189 GVDMWAAGCVVAEMLRGVPL-FAGTTDI--------EQLAIIIRTLGSPRLNQWPELTSLPDYSK 244
            .:|:||.||:.||:|...|| |....||        :|:..|...||.|....||::..:||:.:
 Worm   223 AIDVWAIGCIFAELLTAEPLFFCKEEDIKAQNPYHYDQVKRIFHLLGYPSDADWPDMKKMPDHQR 287

  Fly   245 I------------RFPNSVGIHWDNLFPSCTHAVEINLVSNLVVYNPKNRLKASE 287
            :            .||||:..::|. :...:.:....|:..|:..:|..|:...|
 Worm   288 LLSDARNEGTPIQTFPNSLHRYFDK-WKINSQSSPYRLLVKLLTVDPTKRVSCEE 341

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6800	NP_650984.1	STKc_CCRK	8..295	CDD:270826	94/315 (30%)
cdk-8	NP_492357.2	STKc_CDK8_like	26..348	CDD:270834	94/315 (30%)
		Med15	<423..>566	CDD:312941