DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Archease and arch-1

DIOPT Version :10

Sequence 1:NP_650975.1 Gene:Archease / 42551 FlyBaseID:FBgn0289108 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_492778.1 Gene:arch-1 / 183428 WormBaseID:WBGene00016621 Length:155 Species:Caenorhabditis elegans


Alignment Length:143 Identity:69/143 - (48%)
Similarity:97/143 - (67%) Gaps:6/143 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KYEYLDHTADVQIHGWGSSLKEAFEQCGVAMFGYMTELDYVSVEQCFEI--EAHGDDLESLLFHF 78
            ::|||||.||:|:|.|||:::||||.|.|:||||||:|  ..|::.:|.  :|.||.|:.|||.|
 Worm    17 RFEYLDHPADIQLHSWGSTMEEAFEACLVSMFGYMTDL--AKVDEMYEFYWKASGDSLDGLLFQF 79

  Fly    79 LDELLFLFSAEPYLVCKKLEITKFDVENFEISCHCYGEPFELGKHPQGTEVKAITYSAMQIIQDV 143
            |||.|..|.|||..|.|::||.:||.:.|||....:||.|:..||....::|:.|||.|||.:..
 Worm    80 LDEALNSFHAEPCFVAKRVEILRFDKKKFEIEFRGWGESFDTSKHETEADIKSPTYSNMQINEKP 144

  Fly   144 EASNYEVFVIIDI 156
            |  ..:::||:||
 Worm   145 E--RCDIYVIVDI 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArcheaseNP_650975.1 Archease 17..156 CDD:426527 67/140 (48%)
arch-1NP_492778.1 Archease 18..155 CDD:426527 67/140 (48%)

Return to query results.
Submit another query.