DRSC/TRiP Functional Genomics Resources

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Protein Alignment E2f1 and e2f3

DIOPT Version :10

Sequence 1:NP_001262809.1 Gene:E2f1 / 42550 FlyBaseID:FBgn0011766 Length:821 Species:Drosophila melanogaster
Sequence 2:NP_001074097.2 Gene:e2f3 / 791146 ZFINID:ZDB-GENE-070112-882 Length:429 Species:Danio rerio


Alignment Length:579 Identity:142/579 - (24%)
Similarity:216/579 - (37%) Gaps:189/579 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GGSGTTGHTMVARRLNYDLHGGTTSINNNNNIVIKNESVDLDYDHVLSSSDSNSNGGVAAHLRDH 102
            |||...|..|:...:..:.||..|::::....|..|.:     ...:::..|.:||.|.....|.
Zfish     4 GGSSVPGQVMLTGVVRAEQHGVFTAVSDRRCAVYSNAT-----RIQINTPPSTNNGCVPEASADS 63

  Fly   103 VYISLDKG--HNTGAVATAAAAATAGHTQQQLQQQHHHQNQQQRKATGKSNDITNYYKVKRRPHA 165
            :|.:..:|  |.||...|..........:..:..   ||..:..|.            ::.|..|
Zfish    64 LYTTPLQGSTHGTGLRPTLGRPPAKRRLELDITD---HQYSEPAKT------------LRSRKGA 113

  Fly   166 VSDEIHPKKQAKQSAHHQTVYQKHTASSAPQQLRHSHHQLRHDADAELDEDVVERVAKPASHHPF 230
            :..:| ||                    ||:                                  
Zfish   114 LKLKI-PK--------------------APK---------------------------------- 123

  Fly   231 SLSTPQQQLAASVASSSSSGDRNRADTSLGILTKKFVDLLQESPDGVVDLNEASNRLHVQKRRIY 295
               ||.              ::.|.|||||.|||||..||.:|.|||:|||:|:..|:|||||:|
Zfish   124 ---TPP--------------EKTRYDTSLGFLTKKFCQLLAQSSDGVLDLNKAAIVLNVQKRRLY 171

  Fly   296 DITNVLEGINILEKKSKNNIQWRCGQSMVSQ-------ERSRHIEADSLRLEQQENELNKAIDLM 353
            ||||||||:.:::||||||||| .|.|:.|.       .:|..:..:.|.|.|:|..|::.|...
Zfish   172 DITNVLEGVRLIKKKSKNNIQW-LGSSLPSDGGLPSPAMQSHSLAREMLALTQEERRLDELIQTC 235

  Fly   354 RENLAEISQEVENSGGMAYVTQNDLLNVDLFKDQIVIVIKAPPEAKLVRSATALKFQPLPFNLNL 418
            ..|:.::::|: :|...||||..|:..:...|||.||.||||.|.|                |.:
Zfish   236 TRNVQQMTEEI-HSQKYAYVTYQDIRRIKSLKDQTVIAIKAPSETK----------------LEV 283

  Fly   419 PNTKLPREIYVKAENSGEINVFLCHDTSPENSPIAPGAGYVGAPGAGCVRTATSTRLHPLTNQRL 483
            |:.|...:::: :.:.|.|:||||.|.....||:..|....|                       
Zfish   284 PDPKESLQVHL-SSSKGPIDVFLCTDGGDSGSPLQNGLDVNG----------------------- 324

  Fly   484 NDPLFNNIDAMSTKGLFQTPYRSARNLSKSIEEAAKQSQPEYNNICDIAMGQHHNLN-------- 540
            |.|.|..:.                      :|||.....:     ::.|..:.|.:        
Zfish   325 NHPAFLKVS----------------------QEAASDGPAD-----NVKMNGNSNASVNGFGPVS 362

  Fly   541 -----QQQQQQQQQLLQQPEEDDVDVELNQLVPTLTNPVVRTHQFQQHQQPSIQELFSS 594
                 .........:||||||   .:....|.|.|.:.   .:......:..|.:||.|
Zfish   363 GNAPMSPLSSSLSSILQQPEE---AIPFVPLSPALLSD---EYMLGLGDEQGISDLFDS 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E2f1NP_001262809.1 E2F_TDP 256..318 CDD:460530 43/61 (70%)
E2F_DD 327..444 CDD:473951 35/116 (30%)
coiled coil 327..362 CDD:271137 8/34 (24%)
e2f3NP_001074097.2 E2F_TDP 131..195 CDD:460530 44/64 (69%)
E2F_DD 213..306 CDD:271137 32/110 (29%)
coiled coil 213..244 CDD:271137 7/30 (23%)

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