DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and HB18

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_177248.3 Gene:HB18 / 843431 AraportID:AT1G70920 Length:206 Species:Arabidopsis thaliana


Alignment Length:146 Identity:35/146 - (23%)
Similarity:64/146 - (43%) Gaps:38/146 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 NDSDCD---SPPPLSSSPS-------------ESP---------------LSHDGSGLSRKKRSR 179
            |.|..|   |.|..|.|||             ::|               ::.|.|....::|.:
plant     6 NSSSLDLTISIPSFSPSPSLGDHHGMRDFDINQTPKTEEDREWMIGATPHVNEDDSNSGGRRRKK 70

  Fly   180 AAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQ-------IQQ 237
            ...:..|...||..|.|...|:..::.::|..|:|::.||::||||||.::|.|.       :::
plant    71 LRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKR 135

  Fly   238 HEAALLGASKRVPVQV 253
            ...:|...::|:.::|
plant   136 WFGSLKEQNRRLQIEV 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 18/55 (33%)
HB18NP_177248.3 HOX 66..122 CDD:197696 18/55 (33%)
HALZ 124..167 CDD:128634 4/28 (14%)

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