DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bap and HB5

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_201334.1 Gene:HB5 / 836656 AraportID:AT5G65310 Length:312 Species:Arabidopsis thaliana


Alignment Length:297 Identity:67/297 - (22%)
Similarity:100/297 - (33%) Gaps:85/297 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 TQPKEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAPLDMRRC 143
            |..|:|.|   :|:                  .||...|.|.||.|               |...
plant    21 TTDKQISP---RPT------------------TTGFLYSGAGDYSQ---------------MFDA 49

  Fly   144 TSNDSDCDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEM 208
            ..:|         .|......:.|..|..:.|||....   .||..||:.|.....|....:.::
plant    50 LEDD---------GSLEDLGGVGHASSTAAEKKRRLGV---EQVKALEKNFEIDNKLEPERKVKL 102

  Fly   209 AKSLRLTETQVKIWFQNRRYKTKRKQ---------------------IQQHEAALLGASKRVPVQ 252
            |:.|.|...||.|||||||.:.|.||                     :|:...:|||..|.:..:
plant   103 AQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAK 167

  Fly   253 VLVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGG------LP--LPQMQMPFPYF--Y 307
            :.|  :|........|..|.......:.|  ...|:|::..      :|  .|..::.|..|  :
plant   168 LNV--EGVKGIEENGALKAVEANQSVMAN--NEVLELSHRSPSPPPHIPTDAPTSELAFEMFSIF 228

  Fly   308 PQHKVPQPIPPPTQSSSFVTASSASSSPVPIPIPGAV 344
            |:.:..:..|..:..||.|.  :...||..:...|||
plant   229 PRTENFRDDPADSSDSSAVL--NEEYSPNTVEAAGAV 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 20/55 (36%)
HB5NP_201334.1 Homeodomain 72..125 CDD:459649 21/55 (38%)
HALZ 127..168 CDD:460477 7/40 (18%)

Return to query results.
Submit another query.