DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bap and E5

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster


Alignment Length:426 Identity:99/426 - (23%)
Similarity:128/426 - (30%) Gaps:211/426 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SAGVSAAMAGLSKSLTT----------PFSINDIL----TRSNPETRRMSSVDSEPEPEKLKPSS 56
            |:.|:|:...:|.|.|.          .|||:.|:    |||.|   ...||.|.|.|....|:|
  Fly    24 SSSVAASSTSVSASSTVSASASSKPKLAFSIDSIVGESSTRSAP---LRVSVISSPPPRSESPAS 85

  Fly    57 ------------------------DRERS-----ISKSP-------------------------- 66
                                    ||.||     :|:||                          
  Fly    86 PTNTNNSGRRTPRGYIYCRRRDSLDRSRSPQRSPVSRSPSPPNAGGNPAAAGNTAKSGDPSSGTG 150

  Fly    67 ---------PLCCRDLGLY-KLTQPKEI---------QPSARQPSNYLQY-YAAAMDNNNHHHQA 111
                     ||...:|.|. ..|.|..:         .||...|....|: .|||:   .|||| 
  Fly   151 NPPTLIRPLPLPAPNLALIGNRTSPNAMAVRMAGPPHPPSQPPPFLAAQFQMAAAL---AHHHQ- 211

  Fly   112 TGTSNSSAADYMQRKLAYFGSTLAAPLDMRRCTSNDSDCDSPPPLSSSPSESPLSHDGSG----- 171
                  ......|::|                          ||:.:.|...|..|...|     
  Fly   212 ------QQQQQQQQQL--------------------------PPVPTGPPHGPHPHLPPGQIPLG 244

  Fly   172 ------------------------------------LSR-------------------KKRSRAA 181
                                                |||                   .||.|.|
  Fly   245 IFPGGPHPGHPPPHGHHPFGSAPHLIRDSYPLYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTA 309

  Fly   182 FSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGAS 246
            ||..|:.:||..|....|:.|.||.::|:.|.|||||||:||||||  ||.|::||...      
  Fly   310 FSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRR--TKHKRMQQEGG------ 366

  Fly   247 KRVPVQVLVREDGSTTYAHMAAP----GAGHGLDPA 278
                       |||.|.::..:.    |.|.|.|.|
  Fly   367 -----------DGSDTKSNKGSSSGGGGGGDGEDDA 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 30/55 (55%)
E5NP_524825.1 Homeodomain 304..360 CDD:459649 31/57 (54%)

Return to query results.
Submit another query.