Protein Alignment bap and Scr

DIOPT Version :10

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 441
• Identity: 100/441 - (22%)
• Similarity: 144/441 - (32%)
• Gaps: 183/441 - (41%)

  Fly    17 SKSLTTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRE---RSISKSPPLCCRDLGLYKL 78
            |:||.:|   .|:.||           |..|   ||.|||..|   ||::|..      ||
  Fly   201 SQSLASP---QDLSTR-----------DISP---KLSPSSVVESVARSLNKGV------LG---- 238

  Fly    79 TQPKEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAPLDMRRC 143
                          ..|...|||...|| :|..:|.|...             ..:..|:.....
  Fly   239 --------------GSLAAAAAAAGLNN-NHSGSGVSGGP-------------GNVNVPMHSPGG 275

  Fly   144 TSNDSDCDSPPPLSSSPSESPLSHDGSGLSRK-------------------------KRSRAAFS 183
            ..:||:.||.....||        ..||..:|                         ||.|.:::
  Fly   276 GDSDSESDSGNEAGSS--------QNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYT 332

  Fly   184 HAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKR 248
            ..|..|||:.|...|||:...|.|:|.:|.|||.|:||||||||.|.|:    :|:.|.:..
  Fly   333 RYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK----EHKMASMNI--- 390

  Fly   249 VPVQVLVREDG------------STTYAHMAAPGAGH--GLDPALINIYRHQLQLAYGGLPLPQM 299
            ||..:     |            .:.:||::|..|.|  |....|..:|:.
  Fly   391 VPYHM-----GPYGHPYHQFDIHPSQFAHLSAXDAWHFSGTGXRLNQLYQE-------------- 436

  Fly   300 QMPFPYFYPQHKVPQPIPPPTQSSSFVTASSASSSPVPIPI-------------PGAVRPQRTPC 351
                               |.|:::..:|:|...|....||             ||::....:..
  Fly   437 -------------------PYQTAAAASAASGYQSQDGGPIGGGSVGVGGGAGGPGSLANGGSNG 482

  Fly   352 PSPNGQMMSVESGAES------------------VHSAAED--VDENVEID 382
            ..||....|..|.:::                  .|...:|  :|.|.|.|
  Fly   483 SGPNSLFASAASSSQAPDCIKYPQEFXSQVIIRQQHQQQQDNSMDRNQERD 533

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeodomain	176..232	CDD:459649	28/55 (51%)
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	28/55 (51%)