DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and pb

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster


Alignment Length:68 Identity:34/68 - (50%)
Similarity:46/68 - (67%) Gaps:2/68 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 SGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQ 234
            :||.|  |.|.|:::.|:.|||:.|...:||..|.|.|:|.||.|||.|||:||||||.|.||:.
  Fly   195 NGLPR--RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT 257

  Fly   235 IQQ 237
            :.:
  Fly   258 LSK 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 29/55 (53%)
pbNP_476669.3 Homeodomain 199..255 CDD:459649 30/57 (53%)

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