DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and otp

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster


Alignment Length:322 Identity:77/322 - (23%)
Similarity:118/322 - (36%) Gaps:111/322 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 CDSPPPLS----SSPSESPLSHDGSG--------------LSRKKRSRAAFSHAQVFELERRFAQ 196
            ||:...|:    ||.:.:..:::|:|              .:::||.|..|:.||:.||||.|::
  Fly    73 CDNSNALNGGNGSSGNGNGNNNNGNGNNNNSMQQQDQHLDKNKQKRHRTRFTPAQLNELERCFSK 137

  Fly   197 QRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQ----IQQHEAALL-------------- 243
            ..|.....|.|:|..:.|||::|::||||||.|.|:::    :.:...|||              
  Fly   138 THYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRTPGALLPSHGLPPFGANITN 202

  Fly   244 --------------GASKRVPVQVLVREDGSTTYAHMAAPGAGHGLDPALINI--------YRHQ 286
                          |....|.|..:....|....:...:.....||:.. ||:        |:| 
  Fly   203 IAMGDGLCGTGMFGGDRWSVGVNPMTAGFGQLNQSSPLSSSLNSGLNSG-INMGSALGAGSYQH- 265

  Fly   287 LQLAYGGLPLPQMQMPFPYFYPQHKV----------PQPIPPPTQSS-SFVTASSASSSP----- 335
                ||...|....|     | ||.|          |....||..:| |.||....|:.|     
  Fly   266 ----YGLNALGDSMM-----Y-QHSVGGVSCGPSGSPSATTPPNMNSCSSVTPPPLSAQPNSSQN 320

  Fly   336 ----VPIPIPGAVR---------------PQRTPCPSPNGQ-----MMSVESGA-ESVHSAA 372
                .|:|:....:               |...|.|:...|     |.|...|| :::||.|
  Fly   321 ELNGEPMPLHQQQQQQTHQHQQQQTHQHHPMAPPTPTQQQQQLPQSMQSPSDGANDTLHSIA 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 26/55 (47%)
otpNP_001286654.1 Homeodomain 117..168 CDD:459649 23/50 (46%)

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