Protein Alignment bap and Lim3

DIOPT Version :9

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_001260559.1
• Gene: Lim3 / 35184
• FlyBaseID: FBgn0002023
• Length: 555
• Species: Drosophila melanogaster
• Alignment Length: 265
• Identity: 46/265 - (17%)
• Similarity: 80/265 - (30%)
• Gaps: 100/265 - (37%)

  Fly    32 RSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLC--------------------------- 69
            :.:|....::....:|.||.:.....|.|::..:.|.|
  Fly    85 QQHPHHNHLAVDQDDPNPELVLALISRNRALEATIPKCGGCHELILDRFILKVLERTWHAKCLQC 149

  Fly    70 -------------------CR--------------DLGLYKLTQPKEIQPSARQPSNYLQYYAAA 101
                               |:              |:|:    .|.::...|:....:||.:..|
  Fly   150 SECHGQLNDKCFARNGQLFCKEDFFKRYGTKCSACDMGI----PPTQVVRRAQDNVYHLQCFLCA 210

  Fly   102 MDNNNHHHQATGTSNSSAADYM--QRKLAYFGSTLAAPLDMRRCTSNDSDCDSPPPLSSSPSESP 164
            |        .:.|.|:....|:  .|||.              |..:..:..:          ..
  Fly   211 M--------CSRTLNTGDEFYLMEDRKLI--------------CKRDYEEAKA----------KG 243

  Fly   165 LSHDGS--GLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRR 227
            |..|||  |....||.|...:..|:..|:..:......:...|.::::...|....|::||||||
  Fly   244 LYLDGSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRR 308

  Fly   228 YKTKR 232
            .|.||
  Fly   309 AKEKR 313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	13/52 (25%)
Lim3	NP_001260559.1	LIM1_Lhx3_Lhx4	122..173	CDD:188754	2/50 (4%)
		LIM2_Lhx3_Lhx4	181..236	CDD:188762	15/80 (19%)
		Homeobox	259..312	CDD:278475	13/52 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	45	1.000	Domainoid score	I3555
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.910