DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bap and HOXD3

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:278 Identity:79/278 - (28%)
Similarity:108/278 - (38%) Gaps:42/278 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 SNSSAADYMQRKLAYFGSTLAAPLDMRRCTSNDSDC-DSPPPLSSSPSESPLSHDGSGLSRKKRS 178
            ::||:|...::...:...:.........|.:....| |..||       .|.|         ||.
Human   149 ASSSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPP-------GPAS---------KRV 197

  Fly   179 RAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQ---HEA 240
            |.|::.||:.|||:.|...|||..|.|.|||..|.|||.|:||||||||.|.|:.|..:   |..
Human   198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSP 262

  Fly   241 ALLGASKRVPVQVLVREDGSTTYAHMAAPGAGHGLD----PALINIYRHQLQLAYGGLP----LP 297
            |.....:..|   |....|...|:....|..|...|    ||......:...||....|    ||
Human   263 ASQSPERSPP---LGGAAGHVAYSGQLPPVPGLAYDAPSPPAFAKSQPNMYGLAAYTAPLSSCLP 324

  Fly   298 QMQMPFPYFYPQHKVPQPIPPPTQSSSFVTASSASSSPVPIPIPGAVRPQRTPCPSP--NGQMMS 360
            |.:.   |..|:.   :|.|..:....|.:|:...|   |:.:.|.......|...|  |...:|
Human   325 QQKR---YAAPEF---EPHPMASNGGGFASANLQGS---PVYVGGNFVESMAPASGPVFNLGHLS 380

  Fly   361 VESGAESVHSAAEDVDEN 378
            ..|.|...:|.|..:..|
Human   381 HPSSASVDYSCAAQIPGN 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 32/55 (58%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 11/63 (17%)
Antp-type hexapeptide 160..165 0/4 (0%)
Homeodomain 195..251 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 6/29 (21%)
DUF4074 369..430 CDD:463833 8/30 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.