DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment meigo and UTR3

DIOPT Version :10

Sequence 1:NP_650949.1 Gene:meigo / 42510 FlyBaseID:FBgn0250820 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_563949.1 Gene:UTR3 / 837998 AraportID:AT1G14360 Length:331 Species:Arabidopsis thaliana


Alignment Length:317 Identity:102/317 - (32%)
Similarity:156/317 - (49%) Gaps:50/317 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GIFVCYFLYGIVQEKLTRGRYGEEVQTDGSVGERFTY---------ALALVWVQCLCNYVFAKVL 70
            ||:..|...||:||.|:..::||:       |:||.:         .:.|||     :|:..|: 
plant    20 GIWAAYIYQGILQETLSTKKFGED-------GKRFEHLAFLNLAQNVICLVW-----SYIMIKL- 71

  Fly    71 LTIRPQKEDTTNAGSYVACSLTYLLAMVSTNM-------AMRWVPYPTAVVGKSAKPIPVMILGV 128
                     .:|.||..|...||..|.::..:       |::::.||..|:.||:|.||||::|.
plant    72 ---------WSNGGSGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGS 127

  Fly   129 LIGRKSYSWTRYACVLTIVLGVILF-MYKEGK--VSNLPAETTLLGEVLLFLSLSMDGLTGAVQE 190
            |:....|:...|.|...:..||.:| :.|...  :|.|......||..|.||:|:.||.|.|.|:
plant   128 LVYGIRYTLPEYLCTFLVAGGVSMFALLKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQD 192

  Fly   191 RIRAA-SAPSGQQMMRAMNFWSTL-----MLGVAMVFTGEAKEFMYFTIRHPEAWTHLSLIAVCG 249
            .|.|. ...:...:|..||.|.|:     |.|:.   .|...|.:.|..:||||...:.:..:||
plant   193 SITARYPKTNAWDIMLGMNLWGTIYNMVYMFGLP---HGSGFEAVQFCKQHPEAAWDILMYCLCG 254

  Fly   250 VLGQFFIFLMVASFGPLACSVVTTTRKFFTVLCSVLLFGNVLIARQWLGAVLVFAAL 306
            .:||.||||.::.||.||.:.:||||||.:::.|.:|.||.|.::||....:||..|
plant   255 AVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVSMVFGGL 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meigoNP_650949.1 UAA 8..311 CDD:462479 102/317 (32%)
UTR3NP_563949.1 UAA 16..318 CDD:462479 102/317 (32%)

Return to query results.
Submit another query.