DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment meigo and AT4G32140

DIOPT Version :10

Sequence 1:NP_650949.1 Gene:meigo / 42510 FlyBaseID:FBgn0250820 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_194941.1 Gene:AT4G32140 / 829346 AraportID:AT4G32140 Length:394 Species:Arabidopsis thaliana


Alignment Length:278 Identity:61/278 - (21%)
Similarity:108/278 - (38%) Gaps:46/278 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 TIRPQKEDTTNA----GSYVACSLTYLLAMVSTNMAMRWVPYPTAVVGKSAKPIPVMILGVLIGR 132
            |::.:||.||..    |.|:| .:.::...:| |.|:......:..|..|...:..:.:||.:|:
plant   132 TLKQRKEITTKQIAMYGLYLA-PIWFVTEYLS-NAALARTSVASTTVLSSTSGLFTLFIGVFLGQ 194

  Fly   133 KSYSWTRYACVLTIVLGVILFMYKEGKV---------SNLPAETTLLGEVLLFLSLSMDGLTGAV 188
            .:.:.::...|...:.||:  |...||.         |:|..|.:|:|::...||....||...:
plant   195 DTLNLSKVVAVFVSMAGVV--MTTLGKTWASDESQLNSSLNGERSLMGDLFGLLSAVSYGLFTVL 257

  Fly   189 QERIRAASAPSGQQMMRAMNF-------------WSTLMLGVAMVFTGEAKEFMYFTIRHPEAWT 240
            .::. |.....|..:.:...:             |....||:      |.|    |||.|.....
plant   258 LKKF-AGEEGEGVDVQKLFGYIGLFTLVALWWLVWPLTALGI------EPK----FTIPHSVKVD 311

  Fly   241 HLSLI--AVCGVLGQFFIFLMVASFGPLACSVVTTTRKFFTVLCSVLLFGNVLIARQWLGAVLVF 303
            .:.|.  .:..||..:|..|.|....||..::..:......::..:::.|....|...||:..||
plant   312 EVVLANGFIGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMVADMMIHGRHYSAIYILGSTQVF 376

  Fly   304 AALF---VDMLYGKKAPL 318
            |...   :..|:.||..|
plant   377 AGFVIANISDLFSKKLGL 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meigoNP_650949.1 UAA 8..311 CDD:462479 57/269 (21%)
AT4G32140NP_194941.1 RhaT <160..385 CDD:440461 49/238 (21%)

Return to query results.
Submit another query.