DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment meigo and UTR2

DIOPT Version :10

Sequence 1:NP_650949.1 Gene:meigo / 42510 FlyBaseID:FBgn0250820 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001190806.1 Gene:UTR2 / 828400 AraportID:AT4G23010 Length:392 Species:Arabidopsis thaliana


Alignment Length:400 Identity:95/400 - (23%)
Similarity:158/400 - (39%) Gaps:92/400 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PERSRFVIYAVGIFVCYFLYGIVQEKLTRGRYGEEVQTDGSVGERFTYALALVWVQCLCNYVFAK 68
            |...:|:|...|.|..|.:.|:.:|.:..       :...|.|..||:....|       |:|..
plant    18 PTWQQFLICTSGFFFGYLVNGVCEEYVYN-------RLQFSFGWYFTFIQGFV-------YLFLI 68

  Fly    69 VLL------TIRPQKEDTTNAGSYVACSLTYLLAMVSTNMAMRWVPYPTAVVGKSAKPIPVMILG 127
            .|.      .:.|.:       :||..|...:.:...|..::.::.||..::.||.|.:||||:|
plant    69 YLQGFTTKHIVNPMR-------TYVKLSAVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLPVMIMG 126

  Fly   128 VLIG--RKSYSWTRYACVLTIVLGVILFMYKEGKVSNLPAETTLLGEVLLFLSLSMDGLTGAVQE 190
            ..|.  |:.|....|.....:|||:|||...:.::|   ...:::|.:::..:|.||...|.:||
plant   127 AFIPGLRRKYPVHEYISAFLLVLGLILFTLADAQMS---PNFSMIGIMMITGALIMDAFLGNLQE 188

  Fly   191 RIRAASAPSGQQMMRAMNFWSTLM----LGVAMVFTGEA-------------------------- 225
            .|...: |...||  .|.|.||::    |.|.||.|||.                          
plant   189 AIFTMN-PETTQM--EMLFCSTVVGLPFLFVPMVLTGEVFRAWTACAQSSILSESDKEWNLLFGF 250

  Fly   226 ---------------------KEFMYFTIRHPEAWTHLSLIAVCGVLGQFFIFLMVASFGPLACS 269
                                 |:..:....||..:..|...|:...:||..:..::|.||....:
plant   251 ESTSIDLTRFMIQTGVGLSLEKKSKFVGFLHPYVYGVLVFEAMATFIGQVSVLSLIALFGAATTA 315

  Fly   270 VVTTTRKFFTVLCSVLLFGNVLIARQWLGAVLVFAALFVDML-YGKKAPLATAKKPPV-----EG 328
            ::||.||..|:|.|.|:|...|..:...|.:|:...:.:.|: ...|||.....:|.|     :|
plant   316 LITTARKGVTLLLSYLIFTKPLTEQHGSGLLLIAMGIVLKMVPMDSKAPAKIPARPAVRIAGGDG 380

  Fly   329 KLSEEKKLNS 338
            ...|:::..|
plant   381 DREEDEERKS 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meigoNP_650949.1 UAA 8..311 CDD:462479 85/361 (24%)
UTR2NP_001190806.1 UAA 22..359 CDD:462479 86/363 (24%)

Return to query results.
Submit another query.