DRSC/TRiP Functional Genomics Resources

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Protein Alignment meigo and Slc35a5

DIOPT Version :10

Sequence 1:NP_650949.1 Gene:meigo / 42510 FlyBaseID:FBgn0250820 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_006248404.1 Gene:Slc35a5 / 498081 RGDID:1564361 Length:454 Species:Rattus norvegicus


Alignment Length:210 Identity:41/210 - (19%)
Similarity:77/210 - (36%) Gaps:66/210 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 YACVLTIVLGV---ILFMYKEGKVSNLPAE-------------TTLLGEVLLFLSLSMDGLTGAV 188
            |.|.|.:..|:   :||:.:..|.|.:..:             |.|||.:.:.||.|        
  Rat     5 YLCALGLPKGLLMRVLFLRQFKKSSGMERKCFRRPGLGPPTLYTFLLGVIFITLSSS-------- 61

  Fly   189 QERIRAASAPSGQQ-----MMRAMNFWSTLMLGVAMVFTG-----------------EAKEFMYF 231
              ||......:.::     :...:|..|.||..:..:...                 ..|||..|
  Rat    62 --RILLVKYSANEENKYDYLPTTVNVCSELMKLILCILVSLCIVKKEDHQSKHVRCTSWKEFSGF 124

  Fly   232 TIRHPEAWTHLSLIAVCGVLGQFFIFLMVASFGPLACSVVTTTRKFFTVLCSVLLFGNVLIAR-- 294
            .     .|   |:.|....|....:|.:::...| |.:|:.:.   |:::.:.||| .:::.|  
  Rat   125 L-----KW---SIPAFLYFLDNLIVFYVLSYLQP-AMAVIFSN---FSIITTALLF-RIVLKRHL 176

  Fly   295 ---QWLGAVLVFAAL 306
               ||...:::|.::
  Rat   177 NWIQWASLLILFLSI 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meigoNP_650949.1 UAA 8..311 CDD:462479 41/210 (20%)
Slc35a5XP_006248404.1 Nuc_sug_transp 53..404 CDD:398009 29/162 (18%)

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