DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment meigo and slc35b1

DIOPT Version :10

Sequence 1:NP_650949.1 Gene:meigo / 42510 FlyBaseID:FBgn0250820 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_989418.1 Gene:slc35b1 / 395058 XenbaseID:XB-GENE-972777 Length:342 Species:Xenopus tropicalis


Alignment Length:320 Identity:160/320 - (50%)
Similarity:213/320 - (66%) Gaps:12/320 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SRFVIYAVGIFVCYFLYGIVQEKLTRGRYGEEVQTDGSVGERFTYALALVWVQCLCNYVFAKVLL 71
            :|.::..:|:|||||.|||:||.:|||.|||     |...|:|.:||:||:|||:.|.:|||:|:
 Frog    31 ARLLVCFLGVFVCYFYYGILQETITRGTYGE-----GEKQEKFRFALSLVFVQCIVNALFAKLLI 90

  Fly    72 TIRPQ-KEDTTNAGSYVACSLTYLLAMVSTNMAMRWVPYPTAVVGKSAKPIPVMILGVLIGRKSY 135
            ..... |.|.|.:..|.||||:||.||||:|.|:::|.|||.|:|||.||||||:|||.:.||.|
 Frog    91 QFFDSGKTDRTQSWLYAACSLSYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLRKKY 155

  Fly   136 SWTRYACVLTIVLGVILFMYKEGKVSNLPAETTL-LGEVLLFLSLSMDGLTGAVQERIRAASAPS 199
            ..::|.|||.|||||.|||||.....:...|.|. .||:||.|||::|||||..|:.:||.....
 Frog   156 PLSKYLCVLLIVLGVALFMYKPKNTGSGGDEHTFGYGELLLLLSLTLDGLTGVSQDHMRAHFQTG 220

  Fly   200 GQQMMRAMNFWSTLMLGVAMVFTGEAKEFMYFTIRHPEAWTHLSLIAVCGVLGQFFIFLMVASFG 264
            ...||..:|.||:|.||..:|||||..:|:.||.|:|....::.|.::...|||.|||:.|..||
 Frog   221 SNHMMLYINLWSSLFLGAGIVFTGELWDFLSFTERYPSIVYNIMLFSLTSALGQTFIFMTVVYFG 285

  Fly   265 PLACSVVTTTRKFFTVLCSVLLFGNVLIARQWLGAVLVFAALFVDMLYGKKAPLATAKKP 324
            ||.||::||||||||:|.||:||.|.:.:.||:|.:|||..|.:|..|||     .:|||
 Frog   286 PLTCSIITTTRKFFTILASVILFSNPISSIQWVGTILVFLGLGLDATYGK-----GSKKP 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meigoNP_650949.1 UAA 8..311 CDD:462479 154/304 (51%)
slc35b1NP_989418.1 UAA 32..329 CDD:462479 153/301 (51%)

Return to query results.
Submit another query.