DRSC/TRiP Functional Genomics Resources

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Protein Alignment meigo and Slc35b1

DIOPT Version :10

Sequence 1:NP_650949.1 Gene:meigo / 42510 FlyBaseID:FBgn0250820 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_954512.1 Gene:Slc35b1 / 287642 RGDID:727783 Length:322 Species:Rattus norvegicus


Alignment Length:313 Identity:155/313 - (49%)
Similarity:209/313 - (66%) Gaps:6/313 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LPERSRFVIYAVGIFVCYFLYGIVQEKLTRGRYGEEVQTDGSVGERFTYALALVWVQCLCNYVFA 67
            :|:|.|..:..:|:|||||.|||:|||:|||:|||     |...|.||:||.||::||:.|.:||
  Rat     8 VPDRLRLPLCFLGVFVCYFYYGILQEKITRGKYGE-----GPKQETFTFALTLVFIQCVINAMFA 67

  Fly    68 KVLLT-IRPQKEDTTNAGSYVACSLTYLLAMVSTNMAMRWVPYPTAVVGKSAKPIPVMILGVLIG 131
            |:|:. ....:.|.|....|.|||::|:.||||:|.|:::|.|||.|:|||.||||||:|||.:.
  Rat    68 KILIQFFDTARVDRTRTWLYAACSVSYVGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLL 132

  Fly   132 RKSYSWTRYACVLTIVLGVILFMYKEGKVSNLPAETTLLGEVLLFLSLSMDGLTGAVQERIRAAS 196
            :|.|...:|.|||.||.||.|||||..||..:...|...||:||.|||::|||||..|:.:||..
  Rat   133 KKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGFGELLLLLSLTLDGLTGVSQDHMRAHY 197

  Fly   197 APSGQQMMRAMNFWSTLMLGVAMVFTGEAKEFMYFTIRHPEAWTHLSLIAVCGVLGQFFIFLMVA 261
            ......||..:|.|||::||..::||||..||:.|..|:|....::.|..:...|||.|||:.|.
  Rat   198 QTGSNHMMLNINLWSTVLLGAGILFTGELWEFLSFAERYPTIIYNILLFGLTSALGQSFIFMTVV 262

  Fly   262 SFGPLACSVVTTTRKFFTVLCSVLLFGNVLIARQWLGAVLVFAALFVDMLYGK 314
            .||||.||::||||||||:|.||:||.|.:.:.||:|.||||..|.:|..:||
  Rat   263 YFGPLTCSIITTTRKFFTILASVILFANPISSMQWVGTVLVFLGLGLDAKFGK 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meigoNP_650949.1 UAA 8..311 CDD:462479 151/303 (50%)
Slc35b1NP_954512.1 UAA 16..309 CDD:462479 149/297 (50%)
Di-lysine motif 318..322
Blue background indicates that the domain is not in the aligned region.

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