DRSC/TRiP Functional Genomics Resources

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Protein Alignment meigo and Slc35b1

DIOPT Version :10

Sequence 1:NP_650949.1 Gene:meigo / 42510 FlyBaseID:FBgn0250820 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_058032.3 Gene:Slc35b1 / 110172 MGIID:1343133 Length:322 Species:Mus musculus


Alignment Length:235 Identity:55/235 - (23%)
Similarity:87/235 - (37%) Gaps:62/235 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NRKAELERKKAKLQALREEKDRRRKEKEQKDLEEASGKLGTSETSTRKDLDEMLSSLGV-APVSE 65
            ::||......|...:||:..||..:.|....|     |||.|    .:.::.:||.||. |.:::
Mouse   117 SQKALAPPSSASPMSLRQTSDRDYQTKMDFAL-----KLGYS----GEQVESVLSKLGANALIND 172

  Fly    66 VLSSLSSVNSATSDQSTTHTPDASLQPSINGVSYRKKPVNLCLVSVQATNIPPKETVVYSKQTQT 130
            ||:.|..:.:....:|.|....||..|...|.                     ||.|......:.
Mouse   173 VLAELVRLGNKGDPESQTAAGSASFAPRTVGA---------------------KEAVSPEASLEE 216

  Fly   131 NSSGGHERDAHATDYYDEYNLNPGLEWEDEFTGDDEESSLTHIDHGFHSKLPPGI-------LPH 188
            :||          |.||  ||.|       ...|....:::|.:....|.|  ||       |..
Mouse   217 DSS----------DTYD--NLRP-------IVIDGSNVAMSHGNKEVFSCL--GIQLAVDWFLEK 260

  Fly   189 GLPTVKEVAPAITPQEQKKED--LKEVKELSAEQKQMIIL 226
            |...:....|| ..:||.:.|  :|:.:.|...:|:.|::
Mouse   261 GHKDITVFVPA-WRKEQSRPDAPIKDQEILRKLEKEKILV 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meigoNP_650949.1 UAA 8..311 CDD:462479 53/229 (23%)
Slc35b1NP_058032.3 UAA 16..309 CDD:462479 55/235 (23%)
Di-lysine motif 318..322
Blue background indicates that the domain is not in the aligned region.

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