DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm7-34 and Ftsj3

DIOPT Version :10

Sequence 1:NP_650947.1 Gene:Trm7-34 / 42508 FlyBaseID:FBgn0038861 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001012014.1 Gene:Ftsj3 / 303608 RGDID:1307110 Length:829 Species:Rattus norvegicus


Alignment Length:323 Identity:103/323 - (31%)
Similarity:156/323 - (48%) Gaps:40/323 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GRTSKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRLYEP 66
            |:..|.:||.||.||||.|:|:||||||:|.:..||.|:.....:|||||||.|.||.||  :.|
  Rat     5 GKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAK--FMP 67

  Fly    67 LPPEEREKVKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGMH 131
            :      ...|:.|||..:.|:..|..|:.||:.|...:|:.:.....|..:|::||||:.....
  Rat    68 V------SSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAPNVGASW 126

  Fly   132 DFDSYVQGELLLSALSISTFILEEGGSFVSKIYRADRTSRLYTQLKRFFKNVCVFKPSASRNSSI 196
            ..|:|.|..|.|.||.::...|..||.|::|::|:.....|....::.|..|...||.|||:.|.
  Rat   127 VHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFHRVQATKPQASRHESA 191

  Fly   197 EAFVVAREFCLPDGYKPCNLTTEWHDQPESWVGRKKESPPVVQVPFVAYK-----GELDSDRTYD 256
            |.|||.:.|..||     .:..::.|...::...:.::..|.::  |..|     |..:.|.|  
  Rat   192 EIFVVCQGFLAPD-----KVDAKFFDPKFAFKEVEVQAKTVTEL--VTKKKPKAEGYAEGDLT-- 247

  Fly   257 LGENYVYKEPVQQPLTAAYQ-DILQKTSQVNIKYEGIRVIHDEEMLKKWLENDENKSEKLGAC 318
                ..::..|...|.||.. |.|.|.|:::        |.|:|     |......:|.:.||
  Rat   248 ----LYHRTSVTDFLRAANPVDFLSKASEIS--------IDDKE-----LAQHPATTEDIRAC 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm7-34NP_650947.1 RlmE 1..205 CDD:440062 78/202 (39%)
Ftsj3NP_001012014.1 RlmE 1..200 CDD:440062 78/202 (39%)
DUF3381 231..397 CDD:463375 20/82 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 332..367
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 443..508
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 528..634
Spb1_C 632..823 CDD:462264
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 794..829
Blue background indicates that the domain is not in the aligned region.

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