DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and AT1G27050

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_174025.4 Gene:AT1G27050 / 839594 AraportID:AT1G27050 Length:205 Species:Arabidopsis thaliana


Alignment Length:97 Identity:25/97 - (25%)
Similarity:39/97 - (40%) Gaps:25/97 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 VKRKGGQIRFTSQQTKNLEARFASSKYLSP--EERRHLALQLKLTDRQVKTWFQNRRAKWRRANL 254
            ||.|.|   .|:.:.|...:.| |||.|.|  ..|:|                 .|.::...|.:
plant   125 VKWKEG---VTAGEGKERTSSF-SSKLLRPVMPLRKH-----------------GRSSRLASAIV 168

  Fly   255 SKRSASAQGPIAGAAVGSPSSASSSSVPVLNL 286
            :.||.:.:|......:.||  |::|.|...|:
plant   169 NPRSDNTKGISGDGGISSP--ATTSEVKQRNI 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 11/52 (21%)
AT1G27050NP_174025.4 RRM_SF 49..117 CDD:409669
Blue background indicates that the domain is not in the aligned region.

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