DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and lbx1

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001072559.1 Gene:lbx1 / 780014 XenbaseID:XB-GENE-6455157 Length:265 Species:Xenopus tropicalis


Alignment Length:162 Identity:54/162 - (33%)
Similarity:70/162 - (43%) Gaps:46/162 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 MSNFG-----VKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRR 246
            |:.||     .||:..:..||:.|...||.||...|||||.:|..:|.||.||:.||.|||||||
 Frog   113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRR 177

  Fly   247 AKWRR---------ANLSKRSAS-----------------------AQGPIAGAAVGSPSSASSS 279
            ||.:|         .::.|.|.|                       ::.|..|.:...|.|.|| 
 Frog   178 AKLKRDLEEMKADVESVKKMSPSTVEAVLTISELEEETNSVRDDSRSRSPQLGLSGHMPLSPSS- 241

  Fly   280 SVPVLNLGSGSRCGQQSDEEDRMYLSEDDEDD 311
              |:....:...|.:  ||||    .|.|.||
 Frog   242 --PLTEQHTSKECSE--DEED----VEIDVDD 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 29/50 (58%)
lbx1NP_001072559.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
Homeodomain 126..182 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..265 14/61 (23%)
Blue background indicates that the domain is not in the aligned region.

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