DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and barhl1a

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001017712.3 Gene:barhl1a / 550407 ZFINID:ZDB-GENE-050417-212 Length:299 Species:Danio rerio


Alignment Length:266 Identity:75/266 - (28%)
Similarity:110/266 - (41%) Gaps:69/266 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDIATKSSKAAFSIENILEQKSSSHRSQS---RRGSSQSPVAVTAGIATPHALAMPKASLATGSS 62
            |:::..||   |.||:||     |||:.|   .:|..:||..::           |::.|.:|.|
Zfish     1 MEVSNGSS---FGIESIL-----SHRASSPCMSKGECRSPAELS-----------PRSDLDSGCS 46

  Fly    63 SAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQVLQLQKN 127
            | .|:|..||..:.  :.|.|.|.     .:||.                         ||:.:.
Zfish    47 S-PPSPRRSSVEDA--VHRRARAL-----GLDSP-------------------------LQISQQ 78

  Fly   128 PSLFMPHFQAAAVAAAAAVQPTAYCDQYSPF------TMDCEGFPNPASAAAALY-----CNAYP 181
            |......|....:.|..  :|.|.|..||..      ..||....:..|::.:.|     .:...
Zfish    79 PRTVTSSFLIRDILADC--KPLAACAPYSSTGQSAQDAEDCMDKLHSNSSSDSEYRVKDEADREI 141

  Fly   182 AASFYMSNFGVKR-KGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNR 245
            ::|....|..:|: :..:..||..|...||..|...||||.::|..||..|.|||.|||||:|||
Zfish   142 SSSRDSPNSRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNR 206

  Fly   246 RAKWRR 251
            |.||:|
Zfish   207 RTKWKR 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 28/50 (56%)
barhl1aNP_001017712.3 None

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