Protein Alignment HHEX and Abd-B

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Alignment Length: 346
• Identity: 77/346 - (22%)
• Similarity: 130/346 - (37%)
• Gaps: 113/346 - (32%)

  Fly    19 EQKSSSHRSQSRRGSSQSPVAVTAG---------------IATPHALAMPKA----SLATGSSS- 63
            :|:....:.|.::..:.:|||....               :.:||...:|:.    |:|:|:||
  Fly   119 QQQLQQQQQQQQQQLATTPVAGALSPAQTPTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSN 183

  Fly    64 ---------AAPTP------SPSSATNIYDLSREAAAAQYAMKSMDSSAVLAP---TSLRFNPIY 110
                     ||..|      :|::|:    :|..:.::|  .:.::.|..|||   .::|..|.:
  Fly   184 LQQQQQQQNAAVAPGQTQIVAPTTAS----VSPSSVSSQ--KEDINMSIQLAPLHIPAIRAGPGF 242

  Fly   111 -PDPASLFYQQVLQLQKNPSLFMPHF---------------------------------QAAAVA 141
             .|.::...:.......|...|..|:                                 |..:.|
  Fly   243 ETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAA 307

  Fly   142 AAAA----------------VQPTAYCDQYSPFTMD----CEGFPNP----------ASAAAALY 176
            ||||                |:.|: ...|.|.|..    ..|:|:.          .|..|...
  Fly   308 AAAAYMNEAERHVSAAARQSVEGTS-TSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGP 371

  Fly   177 CNAYPAASFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTW 241
            |...|....:.....|::|  :..::..||..||..|..:.|:|.::|..||..|:||:||||.|
  Fly   372 CTPNPGLHEWTGQVSVRKK--RKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIW 434

  Fly   242 FQNRRAKWRRANLSKRSASAQ 262
            |||||.|.::.  |:|.|:.|
  Fly   435 FQNRRMKNKKN--SQRQANQQ 453

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	24/50 (48%)
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	25/57 (44%)