Protein Alignment HHEX and Alx3

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_001007013.2
• Gene: Alx3 / 365900
• RGDID: 1359270
• Length: 343
• Species: Rattus norvegicus
• Alignment Length: 276
• Identity: 72/276 - (26%)
• Similarity: 103/276 - (37%)
• Gaps: 43/276 - (15%)

  Fly    36 SPVAVTAGIATPHALAMPKASLATGSSSAAP--TPSPSSATNIYDLSREAAAAQYAMKSMDSSAV 98
            :|.|| ...|.|:|.|..:|....|:..|||  .|:|.....   |||..|...
  Rat     7 APFAV-GPAAGPYAAARDEAPGPQGTPDAAPHLRPAPPRGPR---LSRFPACGP----------- 56

  Fly    99 LAPTSLRFNPIYPDPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCE 163
                   ..|..|:||....:.:..|...|.|...||...:..|.......|   .:....:||.
  Rat    57 -------LEPYLPEPAKPPAKYLQDLGPGPVLNGGHFYKGSSEAEEKASKAA---SFPQLPVDCR 111

  Fly   164 GFP---------NPASAAAALYCNAYPAA--SFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSK 217
            |.|         :|....|:|.....|..  |..::....|::..:..|::.|.:.||..|..:.
  Rat   112 GGPRDGPSNVQGSPGPCLASLSVPLSPGLPDSMELAKSKSKKRRNRTTFSTFQLEELEKVFQKTH 176

  Fly   218 YLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPIAGAAVGSPSSASSSSVP 282
            |.....|..|||:..||:.:|:.||||||||||:.....:....:.|...|...|....:.|...
  Rat   177 YPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERYGKIQEGRNPFTTAYDISVLPRTDSHPQ 241

  Fly   283 VLNL-----GSGSRCG 293
            :.|.     ||||..|
  Rat   242 LQNSLWSSPGSGSPGG 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	22/50 (44%)
Alx3	NP_001007013.2	Homeodomain	154..210	CDD:459649	22/55 (40%)