Protein Alignment HHEX and lms

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: XP_555988.3
• Gene: lms / 3289950
• VectorBaseID: AGAMI1_011670
• Length: 479
• Species: Anopheles gambiae
• Alignment Length: 331
• Identity: 86/331 - (25%)
• Similarity: 122/331 - (36%)
• Gaps: 115/331 - (34%)

  Fly     4 ATKSSKAAFSIENILEQKSSSHRSQSRRGSSQSPVA---VTAGIATPHALAMPKASLATGSSSAA 65
            :|.:|..|.|:.|  ...||.|.        ..|||   |....:..|.||.|..|....:||||
Mosquito    13 STITSTMASSVVN--STPSSMHH--------VDPVANNRVKNSFSIEHLLAKPDRSGTASTSSAA 67

  Fly    66 -------------PTPSPSSATN--IYD--LSREAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDP 113
                         |...|:...|  :|.  ::|.|:|.::
Mosquito    68 CYRGMDDRLASSYPIAHPAQLHNSMVYQTLMTRSASAVEF------------------------- 107

  Fly   114 ASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSP------FTMD-CEGFPNPASA 171
                    |.:.||        :.:||..||...|:...:..||      .||| |....:..||
Mosquito   108 --------LDVNKN--------ETSAVPFAADRPPSERAESSSPESSCNEDTMDNCSEIASEGSA 156

  Fly   172 AAALYCNAYPAASFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDR 236
            :..|..:            ..::|..:..|::.|.|.||..|...||||..:|..||.||.||:.
Mosquito   157 SGGLAAH------------DDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLHLTET 209

  Fly   237 QVKTWFQNRRAKWRRANLSKRSASAQGPIAGAAVGSPSSASSSSVPVLNLGSGSR---CGQQSDE 298
            |:|.||||||.||:|    |.:|..:            |.:|.....|.:||.:|   .|
Mosquito   210 QIKIWFQNRRTKWKR----KYTADVE------------SLASHYYSQLGIGSFARPMVVG----- 253

  Fly   299 EDRMYL 304
             ||::|
Mosquito   254 -DRLWL 258

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	27/50 (54%)
lms	XP_555988.3	None