DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and HOXC11

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_055027.1 Gene:HOXC11 / 3227 HGNCID:5123 Length:304 Species:Homo sapiens


Alignment Length:281 Identity:63/281 - (22%)
Similarity:102/281 - (36%) Gaps:73/281 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SSQSPVAVTAGIATPHALAMPKA-SLATGSSSAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSS 96
            ||..|.|.:..|:.|::..:|.. .::.|...:......:|.::.|      |||...|    ..
Human    48 SSFLPQAPSRQISYPYSAQVPPVREVSYGLEPSGKWHHRNSYSSCY------AAADELM----HR 102

  Fly    97 AVLAPTSL-------------RFNPIYP--DPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAV 146
            ..|.|:::             ..:|..|  .||. ||..|.:....|..|...|.          
Human   103 ECLPPSTVTEILMKNEGSYGGHHHPSAPHATPAG-FYSSVNKNSVLPQAFDRFFD---------- 156

  Fly   147 QPTAYCDQYSPFTM-------DCEGFP-------------------------NPASAAAALYCNA 179
              .|||....|...       :.:|.|                         ||:|:.:|.....
Human   157 --NAYCGGGDPPAEPPCSGKGEAKGEPEAPPASGLASRAEAGAEAEAEEENTNPSSSGSAHSVAK 219

  Fly   180 YPAASFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQN 244
            .||.....:....::|  :..::..|.:.||..|..:.|::.|:|..|:..|.|||||||.||||
Human   220 EPAKGAAPNAPRTRKK--RCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQN 282

  Fly   245 RRAKWRRANLSKRSASAQGPI 265
            ||.|.::.:..:....:..|:
Human   283 RRMKEKKLSRDRLQYFSGNPL 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 23/50 (46%)
HOXC11NP_055027.1 DUF3528 42..161 CDD:432284 28/135 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..237 9/72 (13%)
Homeodomain 233..289 CDD:459649 24/57 (42%)

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