DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and hoxb2a

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_571191.1 Gene:hoxb2a / 30338 ZFINID:ZDB-GENE-990415-103 Length:390 Species:Danio rerio


Alignment Length:296 Identity:79/296 - (26%)
Similarity:109/296 - (36%) Gaps:53/296 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SPVAVTAGIATPHALAMPKASLATGSSSAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSAVLA 100
            |.:..:..|..|....:|..|..|| :.|.|.....:|:|...|..:.|               .
Zfish    35 SSIKDSTAIPPPFEHTIPSLSPCTG-NQARPRSQKRTASNGLQLRTQTA---------------P 83

  Fly   101 PTSLRFNPI-YPDPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEG 164
            ||..:..|. ....|.|.::.....:|..|...|  :..|.|||||..|:.....|:     ..|
Zfish    84 PTQHQQGPAPLSGGAPLAHEFPWMKEKKSSKKCP--KPGATAAAAAASPSQASSGYT-----TAG 141

  Fly   165 FPNPASAAAALYCNAYPAASFYMSNFGVKRKGGQIR--FTSQQTKNLEARFASSKYLSPEERRHL 227
            ..:|......|            .|....|:   :|  :|:.|...||..|..:|||....|..:
Zfish   142 LESPTEIQGGL------------DNVSGSRR---LRTAYTNTQLLELEKEFHFNKYLCRPRRVEI 191

  Fly   228 ALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGP-----IAGAAVGSPSSASSSSVPVLNLG 287
            |..|.||:||||.||||||.|.:|.....|......|     :.|....||.|:.|..|.    |
Zfish   192 AALLDLTERQVKVWFQNRRMKHKRQTTHHRDGQEGEPSGFDLLEGTDASSPYSSQSLEVS----G 252

  Fly   288 SGSRCGQQSD--EEDRMYL-SEDDEDDDEDEGEADE 320
            |||....:|:  .....|. |.|......:||:|.:
Zfish   253 SGSAAPSESETCPTTAAYTNSSDKSQPTPEEGQASQ 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 25/52 (48%)
hoxb2aNP_571191.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..73 9/33 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..100 5/33 (15%)
Antp-type hexapeptide 103..108 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..155 14/65 (22%)
Homeodomain 159..215 CDD:459649 26/58 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..338 21/82 (26%)
PRK11907 237..>320 CDD:237019 16/56 (29%)

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