DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and ceh-27

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001256348.1 Gene:ceh-27 / 185853 WormBaseID:WBGene00000449 Length:263 Species:Caenorhabditis elegans


Alignment Length:265 Identity:60/265 - (22%)
Similarity:101/265 - (38%) Gaps:84/265 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LATGSSSAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQV 121
            :::|||::: |.:|:|.|                          ||:..|:.:            
 Worm     1 MSSGSSNSS-TSAPNSVT--------------------------PTTDAFSTL------------ 26

  Fly   122 LQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNA-YPAASF 185
                   |:..|...||.::..|.  |..|...:|.:.            .:|.|..| ||.|:.
 Worm    27 -------SISAPATTAAQMSYFAF--PNQYPHDFSSYN------------TSAAYATAPYPMATH 70

  Fly   186 -YMSNFG------------------VKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQL 231
             .::||.                  :.|:..::.|:.||...||.:|..::|||..:|.:||..:
 Worm    71 PQLANFNRFQTNQLNLGLTTQQNMMISRRKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSI 135

  Fly   232 KLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPIAGAAVGSPSSASSSSVPVLNLGSGSRCGQQS 296
            .|:..|||.||||:|.|.:|....|:........:.....|.....||.    :|||.....::.
 Worm   136 NLSATQVKIWFQNQRYKCKRQEKEKKMDGGCYRDSDRDTDSDRDNDSSG----SLGSSMSGIKKE 196

  Fly   297 DEEDR 301
            ::|||
 Worm   197 EDEDR 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 22/50 (44%)
ceh-27NP_001256348.1 Homeodomain 99..155 CDD:459649 22/55 (40%)

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