DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and hmx1

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_002940264.3 Gene:hmx1 / 100498485 XenbaseID:XB-GENE-6259139 Length:281 Species:Xenopus tropicalis


Alignment Length:119 Identity:41/119 - (34%)
Similarity:57/119 - (47%) Gaps:29/119 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 KRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRR------ 251
            ::|..:..|:..|...||:.|...:|||..||..||..|.||:.|||.||||||.||:|      
 Frog   149 RKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAADL 213

  Fly   252 --ANLSKRS---------------ASAQG----PIAGAAVG--SPSSASSSSVP 282
              ||:|..|               |::.|    .::.|.||  ||.:...:|:|
 Frog   214 EAANISHTSQRIVRVPILYHENSAATSMGFNLPHVSPALVGFSSPVNYPLASIP 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 26/50 (52%)
hmx1XP_002940264.3 Homeodomain 151..207 CDD:459649 27/55 (49%)

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