DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and pitx3

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_002935807.2 Gene:pitx3 / 100496690 XenbaseID:XB-GENE-486162 Length:292 Species:Xenopus tropicalis


Alignment Length:76 Identity:31/76 - (40%)
Similarity:44/76 - (57%) Gaps:6/76 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 KRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRR------ 251
            |::..:..|||||.:.|||.|..::|.....|..:|:...||:.:|:.||:|||||||:      
 Frog    59 KQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ 123

  Fly   252 ANLSKRSASAQ 262
            |.|.|.|..||
 Frog   124 AELCKNSFGAQ 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 23/50 (46%)
pitx3XP_002935807.2 Homeodomain 61..117 CDD:459649 23/55 (42%)
OAR 250..267 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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