Protein Alignment HHEX and cdx1b

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_001092232.1
• Gene: cdx1b / 100004956
• ZFINID: ZDB-GENE-070615-29
• Length: 255
• Species: Danio rerio
• Alignment Length: 210
• Identity: 54/210 - (25%)
• Similarity: 81/210 - (38%)
• Gaps: 60/210 - (28%)

  Fly   106 FNPIYPDP----------ASLFYQQVLQLQKNPSLFMPHF---------QAAAVAAAAAVQPTAY 151
            :||.||.|          :.:......||..:|    |.|         |::..::...:.|.|
Zfish    62 WNPAYPPPREEWTPYGPGSGVSSSSTGQLGFSP----PEFSSVQTPGLLQSSINSSVGQLSPNA- 121

  Fly   152 CDQYSPFTMDCEGFPNPASAAAALYCNAYPAASFYMSNFGVKRKGGQIR--------FTSQQTKN 208
             .:.:|:.......|              ||:|           ||:.|        :|..|...
Zfish   122 -QRRNPYDWMRRSVP--------------PASS-----------GGKTRTKDKYRVVYTDHQRLE 160

  Fly   209 LEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPIAGAAVGSP 273
            ||..|..|:|::...:..||..|.|::||||.||||||||.|:.|  |:......|.:......|
Zfish   161 LEKEFHYSRYITIRRKAELATALSLSERQVKIWFQNRRAKERKIN--KKKMQQPQPASTTTPTPP 223

  Fly   274 SSASSSSVPVLNLGS 288
            .||...:||::...|
Zfish   224 GSALPGNVPMVTSSS 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	24/58 (41%)
cdx1b	NP_001092232.1	Caudal_act	13..140	CDD:461413	18/108 (17%)
		Homeodomain	148..203	CDD:459649	23/54 (43%)