DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and PUP3

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_011020.3 Gene:PUP3 / 856830 SGDID:S000000896 Length:205 Species:Saccharomyces cerevisiae


Alignment Length:116 Identity:28/116 - (24%)
Similarity:46/116 - (39%) Gaps:16/116 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTAVGVRGANCVV------LGVEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRG 89
            |...|.:.|.:||.      ||.:...||...|     ||.... ||.|...||..|...|....
Yeast     9 GGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFE-----KIFHYG-HVFLGITGLATDVTTLNEMF 67

  Fly    90 QVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDA 140
            :.:...::|..|..:..|..|:.::  ...|.:..|  |:.:..::.||::
Yeast    68 RYKTNLYKLKEERAIEPETFTQLVS--SSLYERRFG--PYFVGPVVAGINS 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 28/116 (24%)
PUP3NP_011020.3 proteasome_beta_type_3 8..201 CDD:239728 28/116 (24%)

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